Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC11.78□□□□□ -0.52
AP1S3Q96PC3 AC011477.6-201ENST00000604980 1927 ntBASIC11.78□□□□□ -0.52
AP1S3Q96PC3 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 AC009090.5-201ENST00000624886 2285 ntBASIC11.77□□□□□ -0.52
AP1S3Q96PC3 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
AP1S3Q96PC3 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
AP1S3Q96PC3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC11.77□□□□□ -0.52
AP1S3Q96PC3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
AP1S3Q96PC3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
AP1S3Q96PC3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC11.77□□□□□ -0.52
AP1S3Q96PC3 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
AP1S3Q96PC3 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
AP1S3Q96PC3 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
AP1S3Q96PC3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
AP1S3Q96PC3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
AP1S3Q96PC3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
AP1S3Q96PC3 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC11.77□□□□□ -0.52
AP1S3Q96PC3 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
AP1S3Q96PC3 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
AP1S3Q96PC3 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
AP1S3Q96PC3 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 AL031055.1-201ENST00000606362 631 ntBASIC11.77□□□□□ -0.53
AP1S3Q96PC3 AL121772.3-201ENST00000610840 674 ntBASIC11.77□□□□□ -0.53
AP1S3Q96PC3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
AP1S3Q96PC3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 NXPE3-205ENST00000491511 8074 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 OTOG-202ENST00000399391 8778 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 CICP8-201ENST00000455800 2813 ntBASIC11.76□□□□□ -0.53
AP1S3Q96PC3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 AC041040.2-201ENST00000622926 2899 ntBASIC11.76□□□□□ -0.53
AP1S3Q96PC3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 RNU1-129P-201ENST00000384064 167 ntBASIC11.76□□□□□ -0.53
AP1S3Q96PC3 HIST2H3DP1-201ENST00000401004 416 ntBASIC11.76□□□□□ -0.53
AP1S3Q96PC3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms