Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.76■□□□□ 0.43
CDCA5Q96FF9 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 AC127383.1-201ENST00000444697 1800 ntBASIC17.76■□□□□ 0.43
CDCA5Q96FF9 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 AC011840.2-201ENST00000563063 1520 ntBASIC17.76■□□□□ 0.43
CDCA5Q96FF9 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA5Q96FF9 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.75■□□□□ 0.43
CDCA5Q96FF9 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
CDCA5Q96FF9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDCA5Q96FF9 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDCA5Q96FF9 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDCA5Q96FF9 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDCA5Q96FF9 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CDCA5Q96FF9 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CDCA5Q96FF9 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDCA5Q96FF9 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CDCA5Q96FF9 AC097065.1-201ENST00000425737 517 ntBASIC17.75■□□□□ 0.43
CDCA5Q96FF9 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC17.75■□□□□ 0.43
CDCA5Q96FF9 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC17.75■□□□□ 0.43
CDCA5Q96FF9 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC17.75■□□□□ 0.43
CDCA5Q96FF9 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC17.75■□□□□ 0.43
CDCA5Q96FF9 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDCA5Q96FF9 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDCA5Q96FF9 AL031713.1-201ENST00000564813 661 ntBASIC17.75■□□□□ 0.43
CDCA5Q96FF9 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CDCA5Q96FF9 AL109837.1-201ENST00000603272 613 ntBASIC17.75■□□□□ 0.43
CDCA5Q96FF9 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDCA5Q96FF9 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDCA5Q96FF9 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDCA5Q96FF9 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDCA5Q96FF9 AC022211.2-201ENST00000585075 2527 ntBASIC17.75■□□□□ 0.43
CDCA5Q96FF9 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CDCA5Q96FF9 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.75■□□□□ 0.43
CDCA5Q96FF9 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDCA5Q96FF9 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.75■□□□□ 0.43
CDCA5Q96FF9 AL157414.3-201ENST00000624276 1954 ntBASIC17.75■□□□□ 0.43
CDCA5Q96FF9 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDCA5Q96FF9 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDCA5Q96FF9 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDCA5Q96FF9 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDCA5Q96FF9 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDCA5Q96FF9 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.74■□□□□ 0.43
CDCA5Q96FF9 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDCA5Q96FF9 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CDCA5Q96FF9 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDCA5Q96FF9 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDCA5Q96FF9 AC020910.5-201ENST00000623668 1865 ntBASIC17.74■□□□□ 0.43
CDCA5Q96FF9 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDCA5Q96FF9 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDCA5Q96FF9 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CDCA5Q96FF9 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.74■□□□□ 0.43
CDCA5Q96FF9 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC17.74■□□□□ 0.43
CDCA5Q96FF9 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.74■□□□□ 0.43
CDCA5Q96FF9 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDCA5Q96FF9 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC17.74■□□□□ 0.43
CDCA5Q96FF9 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC17.74■□□□□ 0.43
CDCA5Q96FF9 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDCA5Q96FF9 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
CDCA5Q96FF9 MIR4649-201ENST00000582839 64 ntBASIC17.74■□□□□ 0.43
CDCA5Q96FF9 AC005962.1-201ENST00000584100 773 ntBASIC17.74■□□□□ 0.43
CDCA5Q96FF9 AC007881.3-201ENST00000608897 607 ntBASIC17.74■□□□□ 0.43
CDCA5Q96FF9 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDCA5Q96FF9 FAM90A2P-201ENST00000511144 1395 ntBASIC17.74■□□□□ 0.43
CDCA5Q96FF9 FAM90A25P-201ENST00000528404 1395 ntBASIC17.74■□□□□ 0.43
CDCA5Q96FF9 KRT8P21-201ENST00000430398 1491 ntBASIC17.74■□□□□ 0.43
CDCA5Q96FF9 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDCA5Q96FF9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDCA5Q96FF9 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDCA5Q96FF9 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CDCA5Q96FF9 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CDCA5Q96FF9 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CDCA5Q96FF9 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CDCA5Q96FF9 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CDCA5Q96FF9 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDCA5Q96FF9 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CDCA5Q96FF9 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDCA5Q96FF9 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDCA5Q96FF9 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDCA5Q96FF9 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDCA5Q96FF9 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDCA5Q96FF9 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.73■□□□□ 0.43
CDCA5Q96FF9 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDCA5Q96FF9 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms