Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TRIM11Q96F44 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM11Q96F44 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM11Q96F44 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM11Q96F44 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRIM11Q96F44 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM11Q96F44 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM11Q96F44 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM11Q96F44 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM11Q96F44 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRIM11Q96F44 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM11Q96F44 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
TRIM11Q96F44 AJ011931.1-201ENST00000618749 2492 ntBASIC16.35■□□□□ 0.21
TRIM11Q96F44 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRIM11Q96F44 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM11Q96F44 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM11Q96F44 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TRIM11Q96F44 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRIM11Q96F44 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM11Q96F44 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
TRIM11Q96F44 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM11Q96F44 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM11Q96F44 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.35■□□□□ 0.21
TRIM11Q96F44 AC241585.1-201ENST00000433527 519 ntBASIC16.35■□□□□ 0.21
TRIM11Q96F44 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRIM11Q96F44 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.35■□□□□ 0.21
TRIM11Q96F44 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM11Q96F44 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.35■□□□□ 0.21
TRIM11Q96F44 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM11Q96F44 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.35■□□□□ 0.21
TRIM11Q96F44 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.35■□□□□ 0.21
TRIM11Q96F44 AL590560.3-201ENST00000623350 461 ntBASIC16.35■□□□□ 0.21
TRIM11Q96F44 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM11Q96F44 OR2I1P-210ENST00000642037 4691 ntBASIC16.35■□□□□ 0.21
TRIM11Q96F44 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM11Q96F44 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM11Q96F44 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM11Q96F44 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM11Q96F44 AC007292.2-201ENST00000593524 1812 ntBASIC16.35■□□□□ 0.21
TRIM11Q96F44 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM11Q96F44 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM11Q96F44 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRIM11Q96F44 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRIM11Q96F44 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM11Q96F44 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM11Q96F44 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM11Q96F44 ACE3P-201ENST00000423435 1973 ntBASIC16.35■□□□□ 0.21
TRIM11Q96F44 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM11Q96F44 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM11Q96F44 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM11Q96F44 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM11Q96F44 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM11Q96F44 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM11Q96F44 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM11Q96F44 AP000845.1-201ENST00000581677 2131 ntBASIC16.34■□□□□ 0.21
TRIM11Q96F44 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRIM11Q96F44 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM11Q96F44 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM11Q96F44 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM11Q96F44 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM11Q96F44 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM11Q96F44 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM11Q96F44 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRIM11Q96F44 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRIM11Q96F44 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM11Q96F44 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM11Q96F44 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM11Q96F44 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM11Q96F44 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TRIM11Q96F44 MIR943-201ENST00000401286 94 ntBASIC16.34■□□□□ 0.21
TRIM11Q96F44 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.34■□□□□ 0.21
TRIM11Q96F44 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.34■□□□□ 0.21
TRIM11Q96F44 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.34■□□□□ 0.21
TRIM11Q96F44 IGHV3-42-201ENST00000520410 361 ntBASIC16.34■□□□□ 0.21
TRIM11Q96F44 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.34■□□□□ 0.21
TRIM11Q96F44 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
TRIM11Q96F44 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.34■□□□□ 0.21
TRIM11Q96F44 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.34■□□□□ 0.21
TRIM11Q96F44 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM11Q96F44 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM11Q96F44 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM11Q96F44 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
TRIM11Q96F44 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM11Q96F44 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM11Q96F44 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TRIM11Q96F44 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM11Q96F44 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM11Q96F44 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM11Q96F44 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM11Q96F44 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM11Q96F44 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM11Q96F44 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM11Q96F44 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM11Q96F44 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM11Q96F44 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM11Q96F44 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM11Q96F44 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM11Q96F44 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TRIM11Q96F44 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.33■□□□□ 0.21
TRIM11Q96F44 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms