Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 COX6A1P2-201ENST00000620597 330 ntBASIC18.42■□□□□ 0.54
SNED1Q8TER0 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC18.42■□□□□ 0.54
SNED1Q8TER0 AL805961.1-201ENST00000642026 753 ntBASIC18.42■□□□□ 0.54
SNED1Q8TER0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
SNED1Q8TER0 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.42■□□□□ 0.54
SNED1Q8TER0 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNED1Q8TER0 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SNED1Q8TER0 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.42■□□□□ 0.54
SNED1Q8TER0 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SNED1Q8TER0 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
SNED1Q8TER0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNED1Q8TER0 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNED1Q8TER0 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNED1Q8TER0 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC18.42■□□□□ 0.54
SNED1Q8TER0 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SNED1Q8TER0 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNED1Q8TER0 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNED1Q8TER0 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNED1Q8TER0 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNED1Q8TER0 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNED1Q8TER0 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNED1Q8TER0 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC18.41■□□□□ 0.54
SNED1Q8TER0 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC18.41■□□□□ 0.54
SNED1Q8TER0 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC18.41■□□□□ 0.54
SNED1Q8TER0 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.41■□□□□ 0.54
SNED1Q8TER0 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC18.41■□□□□ 0.54
SNED1Q8TER0 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNED1Q8TER0 AL136295.7-201ENST00000619226 1200 ntBASIC18.41■□□□□ 0.54
SNED1Q8TER0 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC18.41■□□□□ 0.54
SNED1Q8TER0 AC051619.9-201ENST00000623237 597 ntBASIC18.41■□□□□ 0.54
SNED1Q8TER0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
SNED1Q8TER0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.41■□□□□ 0.54
SNED1Q8TER0 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNED1Q8TER0 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNED1Q8TER0 MBLAC2-202ENST00000514906 1936 ntBASIC18.41■□□□□ 0.54
SNED1Q8TER0 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNED1Q8TER0 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNED1Q8TER0 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC18.41■□□□□ 0.54
SNED1Q8TER0 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNED1Q8TER0 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNED1Q8TER0 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC18.41■□□□□ 0.54
SNED1Q8TER0 AC244394.1-201ENST00000435000 1665 ntBASIC18.41■□□□□ 0.54
SNED1Q8TER0 AL360270.3-201ENST00000609118 1348 ntBASIC18.41■□□□□ 0.54
SNED1Q8TER0 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNED1Q8TER0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNED1Q8TER0 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNED1Q8TER0 AMT-204ENST00000427987 1646 ntTSL 5 BASIC18.41■□□□□ 0.54
SNED1Q8TER0 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNED1Q8TER0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.41■□□□□ 0.54
SNED1Q8TER0 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNED1Q8TER0 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNED1Q8TER0 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNED1Q8TER0 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNED1Q8TER0 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNED1Q8TER0 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SNED1Q8TER0 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNED1Q8TER0 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNED1Q8TER0 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SNED1Q8TER0 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNED1Q8TER0 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNED1Q8TER0 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.4■□□□□ 0.54
SNED1Q8TER0 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNED1Q8TER0 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.4■□□□□ 0.54
SNED1Q8TER0 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC18.4■□□□□ 0.54
SNED1Q8TER0 NEU3-205ENST00000531619 582 ntTSL 5 BASIC18.4■□□□□ 0.54
SNED1Q8TER0 STUB1-204ENST00000564370 875 ntTSL 2 BASIC18.4■□□□□ 0.54
SNED1Q8TER0 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNED1Q8TER0 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC18.4■□□□□ 0.54
SNED1Q8TER0 AC087045.2-201ENST00000606279 1003 ntBASIC18.4■□□□□ 0.54
SNED1Q8TER0 MIR6756-201ENST00000616240 63 ntBASIC18.4■□□□□ 0.54
SNED1Q8TER0 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SNED1Q8TER0 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNED1Q8TER0 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.4■□□□□ 0.54
SNED1Q8TER0 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNED1Q8TER0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNED1Q8TER0 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNED1Q8TER0 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SNED1Q8TER0 TNRC18P3-201ENST00000441896 2691 ntBASIC18.4■□□□□ 0.54
SNED1Q8TER0 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNED1Q8TER0 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNED1Q8TER0 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.4■□□□□ 0.54
SNED1Q8TER0 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.4■□□□□ 0.54
SNED1Q8TER0 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SNED1Q8TER0 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNED1Q8TER0 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
SNED1Q8TER0 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.4■□□□□ 0.54
SNED1Q8TER0 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SNED1Q8TER0 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNED1Q8TER0 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.4■□□□□ 0.54
SNED1Q8TER0 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC18.4■□□□□ 0.54
SNED1Q8TER0 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SNED1Q8TER0 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.4■□□□□ 0.54
SNED1Q8TER0 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNED1Q8TER0 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNED1Q8TER0 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNED1Q8TER0 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC18.4■□□□□ 0.54
SNED1Q8TER0 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.4■□□□□ 0.54
SNED1Q8TER0 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC18.4■□□□□ 0.54
SNED1Q8TER0 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC18.4■□□□□ 0.54
SNED1Q8TER0 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms