Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 AC148477.4-201ENST00000613430 1793 ntBASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 DRD5P1-201ENST00000456605 1438 ntBASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 AC098850.1-201ENST00000419919 790 ntBASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 GHSR-202ENST00000427970 912 ntBASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 AC107373.2-201ENST00000607735 490 ntBASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 AL109954.1-202ENST00000564051 2148 ntBASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC148Q8NFR7 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 AC134915.1-201ENST00000426461 574 ntBASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC148Q8NFR7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 AC013268.4-201ENST00000637413 2228 ntBASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 AC138035.3-201ENST00000622706 2791 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms