Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
APLFQ8IW19 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
APLFQ8IW19 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.44■□□□□ 0.06
APLFQ8IW19 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
APLFQ8IW19 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
APLFQ8IW19 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
APLFQ8IW19 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
APLFQ8IW19 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
APLFQ8IW19 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.44■□□□□ 0.06
APLFQ8IW19 AC007686.3-201ENST00000619017 3487 ntBASIC15.44■□□□□ 0.06
APLFQ8IW19 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
APLFQ8IW19 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
APLFQ8IW19 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.44■□□□□ 0.06
APLFQ8IW19 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.43■□□□□ 0.06
APLFQ8IW19 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
APLFQ8IW19 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
APLFQ8IW19 AC136759.1-202ENST00000530858 2194 ntBASIC15.43■□□□□ 0.06
APLFQ8IW19 AC006277.1-201ENST00000624348 1610 ntBASIC15.43■□□□□ 0.06
APLFQ8IW19 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.43■□□□□ 0.06
APLFQ8IW19 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.43■□□□□ 0.06
APLFQ8IW19 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
APLFQ8IW19 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
APLFQ8IW19 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
APLFQ8IW19 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
APLFQ8IW19 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
APLFQ8IW19 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
APLFQ8IW19 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
APLFQ8IW19 TSSK5P-201ENST00000423978 907 ntBASIC15.43■□□□□ 0.06
APLFQ8IW19 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.43■□□□□ 0.06
APLFQ8IW19 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
APLFQ8IW19 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.43■□□□□ 0.06
APLFQ8IW19 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.43■□□□□ 0.06
APLFQ8IW19 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
APLFQ8IW19 AC013467.2-201ENST00000605472 835 ntBASIC15.43■□□□□ 0.06
APLFQ8IW19 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
APLFQ8IW19 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.43■□□□□ 0.06
APLFQ8IW19 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.43■□□□□ 0.06
APLFQ8IW19 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
APLFQ8IW19 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC15.43■□□□□ 0.06
APLFQ8IW19 AL356585.2-201ENST00000625078 2396 ntBASIC15.43■□□□□ 0.06
APLFQ8IW19 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
APLFQ8IW19 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.43■□□□□ 0.06
APLFQ8IW19 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
APLFQ8IW19 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
APLFQ8IW19 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
APLFQ8IW19 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
APLFQ8IW19 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
APLFQ8IW19 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
APLFQ8IW19 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
APLFQ8IW19 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
APLFQ8IW19 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
APLFQ8IW19 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
APLFQ8IW19 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
APLFQ8IW19 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
APLFQ8IW19 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.43■□□□□ 0.06
APLFQ8IW19 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
APLFQ8IW19 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
APLFQ8IW19 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
APLFQ8IW19 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
APLFQ8IW19 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
APLFQ8IW19 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
APLFQ8IW19 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
APLFQ8IW19 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
APLFQ8IW19 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
APLFQ8IW19 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
APLFQ8IW19 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
APLFQ8IW19 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.42■□□□□ 0.06
APLFQ8IW19 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
APLFQ8IW19 SLC6A6P1-201ENST00000413933 1850 ntBASIC15.42■□□□□ 0.06
APLFQ8IW19 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
APLFQ8IW19 GGT3P-204ENST00000453783 1664 ntBASIC15.42■□□□□ 0.06
APLFQ8IW19 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
APLFQ8IW19 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
APLFQ8IW19 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.42■□□□□ 0.06
APLFQ8IW19 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
APLFQ8IW19 AL671710.1-201ENST00000610245 2349 ntBASIC15.42■□□□□ 0.06
APLFQ8IW19 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
APLFQ8IW19 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
APLFQ8IW19 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.42■□□□□ 0.06
APLFQ8IW19 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.42■□□□□ 0.06
APLFQ8IW19 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.42■□□□□ 0.06
APLFQ8IW19 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
APLFQ8IW19 KRT18P34-201ENST00000488218 1270 ntBASIC15.42■□□□□ 0.06
APLFQ8IW19 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.42■□□□□ 0.06
APLFQ8IW19 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.42■□□□□ 0.06
APLFQ8IW19 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.42■□□□□ 0.06
APLFQ8IW19 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
APLFQ8IW19 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.42■□□□□ 0.06
APLFQ8IW19 AL662799.1-202ENST00000614205 422 ntBASIC15.42■□□□□ 0.06
APLFQ8IW19 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
APLFQ8IW19 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.42■□□□□ 0.06
APLFQ8IW19 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.42■□□□□ 0.06
APLFQ8IW19 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.42■□□□□ 0.06
APLFQ8IW19 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
APLFQ8IW19 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
APLFQ8IW19 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.42■□□□□ 0.06
APLFQ8IW19 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
APLFQ8IW19 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
APLFQ8IW19 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
APLFQ8IW19 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms