Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTTNQ86VV8 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTTNQ86VV8 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTTNQ86VV8 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RTTNQ86VV8 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTTNQ86VV8 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTTNQ86VV8 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTTNQ86VV8 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
RTTNQ86VV8 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.71□□□□□ -0.21
RTTNQ86VV8 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.71□□□□□ -0.21
RTTNQ86VV8 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC13.71□□□□□ -0.21
RTTNQ86VV8 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.71□□□□□ -0.21
RTTNQ86VV8 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RTTNQ86VV8 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTTNQ86VV8 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RTTNQ86VV8 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTTNQ86VV8 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RTTNQ86VV8 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.71□□□□□ -0.21
RTTNQ86VV8 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RTTNQ86VV8 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RTTNQ86VV8 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTTNQ86VV8 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.71□□□□□ -0.21
RTTNQ86VV8 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RTTNQ86VV8 AL109954.1-202ENST00000564051 2148 ntBASIC13.71□□□□□ -0.22
RTTNQ86VV8 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RTTNQ86VV8 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
RTTNQ86VV8 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RTTNQ86VV8 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RTTNQ86VV8 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.22
RTTNQ86VV8 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.71□□□□□ -0.22
RTTNQ86VV8 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.71□□□□□ -0.22
RTTNQ86VV8 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.71□□□□□ -0.22
RTTNQ86VV8 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.71□□□□□ -0.22
RTTNQ86VV8 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.71□□□□□ -0.22
RTTNQ86VV8 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
RTTNQ86VV8 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.71□□□□□ -0.22
RTTNQ86VV8 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RTTNQ86VV8 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RTTNQ86VV8 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.71□□□□□ -0.22
RTTNQ86VV8 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RTTNQ86VV8 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.71□□□□□ -0.22
RTTNQ86VV8 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RTTNQ86VV8 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RTTNQ86VV8 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.71□□□□□ -0.22
RTTNQ86VV8 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RTTNQ86VV8 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RTTNQ86VV8 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTTNQ86VV8 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.7□□□□□ -0.22
RTTNQ86VV8 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
RTTNQ86VV8 SLC7A15P-201ENST00000424028 1363 ntBASIC13.7□□□□□ -0.22
RTTNQ86VV8 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTTNQ86VV8 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.7□□□□□ -0.22
RTTNQ86VV8 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTTNQ86VV8 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTTNQ86VV8 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTTNQ86VV8 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.7□□□□□ -0.22
RTTNQ86VV8 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RTTNQ86VV8 TMBIM7P-203ENST00000641617 1718 ntBASIC13.7□□□□□ -0.22
RTTNQ86VV8 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.7□□□□□ -0.22
RTTNQ86VV8 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTTNQ86VV8 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.7□□□□□ -0.22
RTTNQ86VV8 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.7□□□□□ -0.22
RTTNQ86VV8 AC119751.2-201ENST00000504529 210 ntBASIC13.7□□□□□ -0.22
RTTNQ86VV8 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.7□□□□□ -0.22
RTTNQ86VV8 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.7□□□□□ -0.22
RTTNQ86VV8 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.7□□□□□ -0.22
RTTNQ86VV8 AL162274.1-201ENST00000617191 1098 ntBASIC13.7□□□□□ -0.22
RTTNQ86VV8 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
RTTNQ86VV8 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTTNQ86VV8 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTTNQ86VV8 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
RTTNQ86VV8 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RTTNQ86VV8 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RTTNQ86VV8 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RTTNQ86VV8 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.7□□□□□ -0.22
RTTNQ86VV8 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
RTTNQ86VV8 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTTNQ86VV8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RTTNQ86VV8 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RTTNQ86VV8 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTTNQ86VV8 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
RTTNQ86VV8 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.7□□□□□ -0.22
RTTNQ86VV8 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
RTTNQ86VV8 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RTTNQ86VV8 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTTNQ86VV8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.7□□□□□ -0.22
RTTNQ86VV8 AC098614.1-201ENST00000368528 745 ntBASIC13.7□□□□□ -0.22
RTTNQ86VV8 AC112492.5-201ENST00000421897 457 ntBASIC13.7□□□□□ -0.22
RTTNQ86VV8 SPTLC1P1-201ENST00000447199 261 ntBASIC13.7□□□□□ -0.22
RTTNQ86VV8 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.7□□□□□ -0.22
RTTNQ86VV8 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.7□□□□□ -0.22
RTTNQ86VV8 AC004790.1-201ENST00000612686 536 ntBASIC13.7□□□□□ -0.22
RTTNQ86VV8 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.7□□□□□ -0.22
RTTNQ86VV8 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTTNQ86VV8 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.7□□□□□ -0.22
RTTNQ86VV8 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RTTNQ86VV8 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTTNQ86VV8 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTTNQ86VV8 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
RTTNQ86VV8 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms