Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 KLF2P3-201ENST00000451977 1087 ntBASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 AL390754.1-201ENST00000619088 582 ntBASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 AC118758.2-201ENST00000614242 2813 ntBASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.21■□□□□ 0.18
FOXR1Q6PIV2 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
FOXR1Q6PIV2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.21■□□□□ 0.18
FOXR1Q6PIV2 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
FOXR1Q6PIV2 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.18
FOXR1Q6PIV2 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 KRT8P39-201ENST00000396270 1433 ntBASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 AC107890.1-201ENST00000422478 521 ntBASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 TSPY16P-201ENST00000449843 468 ntBASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 TERF1P3-201ENST00000505638 1227 ntBASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 AC107918.2-201ENST00000530817 355 ntBASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 MIR4515-201ENST00000584082 81 ntBASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 AL161645.1-201ENST00000622716 1255 ntBASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 AL035252.4-201ENST00000624174 288 ntBASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 AL139385.1-201ENST00000611744 3272 ntBASIC16.2■□□□□ 0.18
FOXR1Q6PIV2 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 FO538757.1-201ENST00000623083 1397 ntBASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXR1Q6PIV2 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms