Protein–RNA interactions for Protein: Q6IC98

GRAMD4, GRAM domain-containing protein 4, humanhuman

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD4Q6IC98 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
GRAMD4Q6IC98 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GRAMD4Q6IC98 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GRAMD4Q6IC98 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GRAMD4Q6IC98 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.04■□□□□ 0.16
GRAMD4Q6IC98 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.04■□□□□ 0.16
GRAMD4Q6IC98 SBF1P1-201ENST00000444527 5631 ntBASIC16.04■□□□□ 0.16
GRAMD4Q6IC98 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.04■□□□□ 0.16
GRAMD4Q6IC98 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.04■□□□□ 0.16
GRAMD4Q6IC98 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.04■□□□□ 0.16
GRAMD4Q6IC98 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 HLA-V-201ENST00000429037 534 ntBASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 AC112504.1-201ENST00000623415 1841 ntBASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GRAMD4Q6IC98 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 AC068587.3-201ENST00000526613 355 ntBASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 AC009486.1-201ENST00000569860 813 ntBASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 MIR4259-201ENST00000584466 101 ntBASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GRAMD4Q6IC98 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
GRAMD4Q6IC98 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
GRAMD4Q6IC98 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
GRAMD4Q6IC98 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.02■□□□□ 0.15
GRAMD4Q6IC98 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
GRAMD4Q6IC98 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.02■□□□□ 0.15
GRAMD4Q6IC98 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
GRAMD4Q6IC98 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.15
GRAMD4Q6IC98 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
GRAMD4Q6IC98 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
GRAMD4Q6IC98 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
GRAMD4Q6IC98 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms