Protein–RNA interactions for Protein: Q68CL5

TPGS2, Tubulin polyglutamylase complex subunit 2, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2Q68CL5 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPGS2Q68CL5 PRAL-201ENST00000624952 3286 ntBASIC16■□□□□ 0.15
TPGS2Q68CL5 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16■□□□□ 0.15
TPGS2Q68CL5 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPGS2Q68CL5 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPGS2Q68CL5 CLUHP2-201ENST00000426660 1303 ntBASIC16■□□□□ 0.15
TPGS2Q68CL5 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16■□□□□ 0.15
TPGS2Q68CL5 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16■□□□□ 0.15
TPGS2Q68CL5 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16■□□□□ 0.15
TPGS2Q68CL5 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TPGS2Q68CL5 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPGS2Q68CL5 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
TPGS2Q68CL5 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPGS2Q68CL5 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TPGS2Q68CL5 AC012508.2-201ENST00000567613 1472 ntBASIC16■□□□□ 0.15
TPGS2Q68CL5 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPGS2Q68CL5 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16■□□□□ 0.15
TPGS2Q68CL5 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16■□□□□ 0.15
TPGS2Q68CL5 AL136309.1-201ENST00000403917 691 ntBASIC16■□□□□ 0.15
TPGS2Q68CL5 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16■□□□□ 0.15
TPGS2Q68CL5 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16■□□□□ 0.15
TPGS2Q68CL5 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16■□□□□ 0.15
TPGS2Q68CL5 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16■□□□□ 0.15
TPGS2Q68CL5 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16■□□□□ 0.15
TPGS2Q68CL5 AP003171.2-201ENST00000528208 925 ntBASIC16■□□□□ 0.15
TPGS2Q68CL5 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPGS2Q68CL5 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
TPGS2Q68CL5 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16■□□□□ 0.15
TPGS2Q68CL5 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16■□□□□ 0.15
TPGS2Q68CL5 AL606495.2-201ENST00000605867 535 ntBASIC16■□□□□ 0.15
TPGS2Q68CL5 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TPGS2Q68CL5 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16■□□□□ 0.15
TPGS2Q68CL5 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPGS2Q68CL5 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPGS2Q68CL5 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPGS2Q68CL5 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16■□□□□ 0.15
TPGS2Q68CL5 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TPGS2Q68CL5 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16■□□□□ 0.15
TPGS2Q68CL5 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TPGS2Q68CL5 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16■□□□□ 0.15
TPGS2Q68CL5 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16■□□□□ 0.15
TPGS2Q68CL5 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16■□□□□ 0.15
TPGS2Q68CL5 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16■□□□□ 0.15
TPGS2Q68CL5 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 LINC02199-201ENST00000506655 2702 ntBASIC15.99■□□□□ 0.15
TPGS2Q68CL5 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 CALR4P-201ENST00000431943 946 ntBASIC15.99■□□□□ 0.15
TPGS2Q68CL5 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 CHMP1AP1-201ENST00000445563 662 ntBASIC15.99■□□□□ 0.15
TPGS2Q68CL5 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.99■□□□□ 0.15
TPGS2Q68CL5 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPGS2Q68CL5 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TPGS2Q68CL5 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPGS2Q68CL5 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPGS2Q68CL5 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TPGS2Q68CL5 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPGS2Q68CL5 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPGS2Q68CL5 KRT8P4-201ENST00000509735 1454 ntBASIC15.98■□□□□ 0.15
TPGS2Q68CL5 AC138028.6-201ENST00000616106 1482 ntBASIC15.98■□□□□ 0.15
TPGS2Q68CL5 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TPGS2Q68CL5 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TPGS2Q68CL5 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPGS2Q68CL5 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPGS2Q68CL5 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms