Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC113367.3-201ENST00000508316 1912 ntBASIC14.43□□□□□ -0.1
RFX4Q33E94 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
RFX4Q33E94 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFX4Q33E94 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFX4Q33E94 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
RFX4Q33E94 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.43□□□□□ -0.1
RFX4Q33E94 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RFX4Q33E94 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFX4Q33E94 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFX4Q33E94 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RFX4Q33E94 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFX4Q33E94 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RFX4Q33E94 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.43□□□□□ -0.1
RFX4Q33E94 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.43□□□□□ -0.1
RFX4Q33E94 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RFX4Q33E94 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.43□□□□□ -0.1
RFX4Q33E94 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.43□□□□□ -0.1
RFX4Q33E94 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.43□□□□□ -0.1
RFX4Q33E94 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFX4Q33E94 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RFX4Q33E94 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.43□□□□□ -0.1
RFX4Q33E94 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.43□□□□□ -0.1
RFX4Q33E94 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.43□□□□□ -0.1
RFX4Q33E94 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.43□□□□□ -0.1
RFX4Q33E94 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.43□□□□□ -0.1
RFX4Q33E94 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.43□□□□□ -0.1
RFX4Q33E94 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFX4Q33E94 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFX4Q33E94 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
RFX4Q33E94 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.43□□□□□ -0.1
RFX4Q33E94 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.43□□□□□ -0.1
RFX4Q33E94 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.43□□□□□ -0.1
RFX4Q33E94 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFX4Q33E94 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFX4Q33E94 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
RFX4Q33E94 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RFX4Q33E94 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFX4Q33E94 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.43□□□□□ -0.1
RFX4Q33E94 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFX4Q33E94 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFX4Q33E94 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.43□□□□□ -0.1
RFX4Q33E94 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFX4Q33E94 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFX4Q33E94 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.42□□□□□ -0.1
RFX4Q33E94 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFX4Q33E94 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFX4Q33E94 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFX4Q33E94 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFX4Q33E94 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFX4Q33E94 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.42□□□□□ -0.1
RFX4Q33E94 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFX4Q33E94 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFX4Q33E94 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFX4Q33E94 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
RFX4Q33E94 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.42□□□□□ -0.1
RFX4Q33E94 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFX4Q33E94 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFX4Q33E94 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFX4Q33E94 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFX4Q33E94 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
RFX4Q33E94 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFX4Q33E94 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.42□□□□□ -0.1
RFX4Q33E94 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.42□□□□□ -0.1
RFX4Q33E94 RPS8P6-201ENST00000426177 609 ntBASIC14.42□□□□□ -0.1
RFX4Q33E94 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.42□□□□□ -0.1
RFX4Q33E94 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.42□□□□□ -0.1
RFX4Q33E94 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.42□□□□□ -0.1
RFX4Q33E94 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.42□□□□□ -0.1
RFX4Q33E94 AC027307.2-201ENST00000591252 911 ntBASIC14.42□□□□□ -0.1
RFX4Q33E94 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.42□□□□□ -0.1
RFX4Q33E94 AC008267.7-201ENST00000624570 1194 ntBASIC14.42□□□□□ -0.1
RFX4Q33E94 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
RFX4Q33E94 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFX4Q33E94 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFX4Q33E94 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RFX4Q33E94 AC117489.1-201ENST00000625169 3217 ntBASIC14.42□□□□□ -0.1
RFX4Q33E94 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFX4Q33E94 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFX4Q33E94 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFX4Q33E94 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
RFX4Q33E94 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFX4Q33E94 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFX4Q33E94 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
RFX4Q33E94 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.42□□□□□ -0.1
RFX4Q33E94 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.42□□□□□ -0.1
RFX4Q33E94 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFX4Q33E94 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFX4Q33E94 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFX4Q33E94 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.42□□□□□ -0.1
RFX4Q33E94 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFX4Q33E94 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFX4Q33E94 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFX4Q33E94 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.42□□□□□ -0.1
RFX4Q33E94 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFX4Q33E94 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFX4Q33E94 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFX4Q33E94 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFX4Q33E94 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.41□□□□□ -0.1
RFX4Q33E94 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFX4Q33E94 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms