Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC004706.3-202ENST00000621574 984 ntBASIC10.95□□□□□ -0.66
CKS1BP61024 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS1BP61024 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC10.95□□□□□ -0.66
CKS1BP61024 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC10.95□□□□□ -0.66
CKS1BP61024 AC112504.1-201ENST00000623415 1841 ntBASIC10.95□□□□□ -0.66
CKS1BP61024 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC10.95□□□□□ -0.66
CKS1BP61024 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC10.95□□□□□ -0.66
CKS1BP61024 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS1BP61024 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
CKS1BP61024 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS1BP61024 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC10.95□□□□□ -0.66
CKS1BP61024 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC10.95□□□□□ -0.66
CKS1BP61024 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS1BP61024 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
CKS1BP61024 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS1BP61024 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC10.94□□□□□ -0.66
CKS1BP61024 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS1BP61024 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
CKS1BP61024 COCH-203ENST00000460581 2688 ntTSL 2 BASIC10.94□□□□□ -0.66
CKS1BP61024 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS1BP61024 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS1BP61024 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC10.94□□□□□ -0.66
CKS1BP61024 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS1BP61024 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS1BP61024 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
CKS1BP61024 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS1BP61024 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS1BP61024 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CKS1BP61024 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS1BP61024 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS1BP61024 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
CKS1BP61024 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC10.94□□□□□ -0.66
CKS1BP61024 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS1BP61024 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC10.94□□□□□ -0.66
CKS1BP61024 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS1BP61024 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC10.94□□□□□ -0.66
CKS1BP61024 AL358933.1-201ENST00000565046 2830 ntBASIC10.94□□□□□ -0.66
CKS1BP61024 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC10.94□□□□□ -0.66
CKS1BP61024 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC10.94□□□□□ -0.66
CKS1BP61024 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC10.94□□□□□ -0.66
CKS1BP61024 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CKS1BP61024 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC10.94□□□□□ -0.66
CKS1BP61024 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
CKS1BP61024 RNF151-202ENST00000569210 853 ntTSL 2 BASIC10.94□□□□□ -0.66
CKS1BP61024 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC10.94□□□□□ -0.66
CKS1BP61024 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
CKS1BP61024 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC10.94□□□□□ -0.66
CKS1BP61024 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC10.94□□□□□ -0.66
CKS1BP61024 AL805961.1-202ENST00000641562 540 ntBASIC10.94□□□□□ -0.66
CKS1BP61024 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CKS1BP61024 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CKS1BP61024 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
CKS1BP61024 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CKS1BP61024 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC10.94□□□□□ -0.66
CKS1BP61024 AC069224.1-201ENST00000566372 1715 ntBASIC10.94□□□□□ -0.66
CKS1BP61024 USO1-201ENST00000264904 4135 ntTSL 2 BASIC10.94□□□□□ -0.66
CKS1BP61024 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CKS1BP61024 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CKS1BP61024 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS1BP61024 SLC22A20-204ENST00000530038 1673 ntBASIC10.94□□□□□ -0.66
CKS1BP61024 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC10.94□□□□□ -0.66
CKS1BP61024 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
CKS1BP61024 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CKS1BP61024 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC10.94□□□□□ -0.66
CKS1BP61024 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC10.94□□□□□ -0.66
CKS1BP61024 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CKS1BP61024 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC10.94□□□□□ -0.66
CKS1BP61024 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
CKS1BP61024 AC099521.2-201ENST00000619354 2036 ntBASIC10.94□□□□□ -0.66
CKS1BP61024 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS1BP61024 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CKS1BP61024 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS1BP61024 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS1BP61024 RDX-218ENST00000544551 4117 ntTSL 2 BASIC10.94□□□□□ -0.66
CKS1BP61024 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC10.94□□□□□ -0.66
CKS1BP61024 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC10.94□□□□□ -0.66
CKS1BP61024 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS1BP61024 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC10.94□□□□□ -0.66
CKS1BP61024 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CKS1BP61024 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC10.93□□□□□ -0.66
CKS1BP61024 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
CKS1BP61024 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
CKS1BP61024 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
CKS1BP61024 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
CKS1BP61024 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
CKS1BP61024 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC10.93□□□□□ -0.66
CKS1BP61024 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
CKS1BP61024 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CKS1BP61024 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CKS1BP61024 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC10.93□□□□□ -0.66
CKS1BP61024 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CKS1BP61024 CSPG4P11-201ENST00000560634 4910 ntBASIC10.93□□□□□ -0.66
CKS1BP61024 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CKS1BP61024 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CKS1BP61024 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CKS1BP61024 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CKS1BP61024 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
CKS1BP61024 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC10.93□□□□□ -0.66
CKS1BP61024 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC10.93□□□□□ -0.66
CKS1BP61024 NUTM2HP-201ENST00000442076 2498 ntBASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms