Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC11.32□□□□□ -0.6
APOC4P55056 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC11.32□□□□□ -0.6
APOC4P55056 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
APOC4P55056 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
APOC4P55056 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC11.32□□□□□ -0.6
APOC4P55056 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
APOC4P55056 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
APOC4P55056 AGER-206ENST00000375070 1463 ntTSL 5 BASIC11.32□□□□□ -0.6
APOC4P55056 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
APOC4P55056 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC11.31□□□□□ -0.6
APOC4P55056 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC11.31□□□□□ -0.6
APOC4P55056 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC11.31□□□□□ -0.6
APOC4P55056 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC11.31□□□□□ -0.6
APOC4P55056 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC11.31□□□□□ -0.6
APOC4P55056 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
APOC4P55056 SBF1P1-201ENST00000444527 5631 ntBASIC11.31□□□□□ -0.6
APOC4P55056 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
APOC4P55056 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC11.31□□□□□ -0.6
APOC4P55056 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
APOC4P55056 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC11.31□□□□□ -0.6
APOC4P55056 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC11.31□□□□□ -0.6
APOC4P55056 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
APOC4P55056 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
APOC4P55056 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 AC016694.1-201ENST00000434179 700 ntBASIC11.31□□□□□ -0.6
APOC4P55056 KRT223P-202ENST00000449164 1292 ntBASIC11.31□□□□□ -0.6
APOC4P55056 AC114812.1-204ENST00000449669 728 ntBASIC11.31□□□□□ -0.6
APOC4P55056 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 AP001889.1-201ENST00000525414 633 ntBASIC11.31□□□□□ -0.6
APOC4P55056 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC11.31□□□□□ -0.6
APOC4P55056 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
APOC4P55056 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC11.31□□□□□ -0.6
APOC4P55056 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC11.31□□□□□ -0.6
APOC4P55056 CLUHP6-201ENST00000580789 941 ntBASIC11.31□□□□□ -0.6
APOC4P55056 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 AL645728.2-202ENST00000641679 227 ntBASIC11.31□□□□□ -0.6
APOC4P55056 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
APOC4P55056 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC11.31□□□□□ -0.6
APOC4P55056 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC11.31□□□□□ -0.6
APOC4P55056 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC11.31□□□□□ -0.6
APOC4P55056 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
APOC4P55056 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC11.31□□□□□ -0.6
APOC4P55056 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
APOC4P55056 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOC4P55056 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
APOC4P55056 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC4P55056 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC4P55056 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
APOC4P55056 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC11.3□□□□□ -0.6
APOC4P55056 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
APOC4P55056 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC4P55056 BANP-204ENST00000393208 2283 ntTSL 2 BASIC11.3□□□□□ -0.6
APOC4P55056 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC4P55056 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC11.3□□□□□ -0.6
APOC4P55056 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC4P55056 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
APOC4P55056 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC4P55056 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC4P55056 MFF-204ENST00000353339 2186 ntTSL 5 BASIC11.3□□□□□ -0.6
APOC4P55056 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
APOC4P55056 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC4P55056 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
APOC4P55056 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC4P55056 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC4P55056 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
APOC4P55056 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
APOC4P55056 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC4P55056 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC4P55056 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC11.3□□□□□ -0.6
APOC4P55056 AC079776.1-201ENST00000401540 1152 ntBASIC11.3□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms