Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AL590560.3-201ENST00000623350 461 ntBASIC14.44□□□□□ -0.1
RNF144AP50876 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.44□□□□□ -0.1
RNF144AP50876 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF144AP50876 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.44□□□□□ -0.1
RNF144AP50876 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF144AP50876 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RNF144AP50876 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.44□□□□□ -0.1
RNF144AP50876 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF144AP50876 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RNF144AP50876 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF144AP50876 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF144AP50876 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF144AP50876 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
RNF144AP50876 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RNF144AP50876 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RNF144AP50876 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF144AP50876 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF144AP50876 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.44□□□□□ -0.1
RNF144AP50876 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF144AP50876 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF144AP50876 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF144AP50876 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
RNF144AP50876 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RNF144AP50876 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
RNF144AP50876 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.43□□□□□ -0.1
RNF144AP50876 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.43□□□□□ -0.1
RNF144AP50876 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
RNF144AP50876 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
RNF144AP50876 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
RNF144AP50876 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 SSR1P1-201ENST00000407630 814 ntBASIC14.43□□□□□ -0.1
RNF144AP50876 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.43□□□□□ -0.1
RNF144AP50876 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.43□□□□□ -0.1
RNF144AP50876 AL589987.1-201ENST00000453380 819 ntBASIC14.43□□□□□ -0.1
RNF144AP50876 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.43□□□□□ -0.1
RNF144AP50876 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.43□□□□□ -0.1
RNF144AP50876 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC14.43□□□□□ -0.1
RNF144AP50876 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.43□□□□□ -0.1
RNF144AP50876 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
RNF144AP50876 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.43□□□□□ -0.1
RNF144AP50876 AL359258.3-201ENST00000622910 2331 ntBASIC14.43□□□□□ -0.1
RNF144AP50876 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.43□□□□□ -0.1
RNF144AP50876 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.43□□□□□ -0.1
RNF144AP50876 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
RNF144AP50876 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.43□□□□□ -0.1
RNF144AP50876 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF144AP50876 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RNF144AP50876 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RNF144AP50876 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RNF144AP50876 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF144AP50876 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF144AP50876 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF144AP50876 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RNF144AP50876 AC148477.4-201ENST00000613430 1793 ntBASIC14.42□□□□□ -0.1
RNF144AP50876 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF144AP50876 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RNF144AP50876 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RNF144AP50876 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF144AP50876 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RNF144AP50876 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RNF144AP50876 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.42□□□□□ -0.1
RNF144AP50876 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.42□□□□□ -0.1
RNF144AP50876 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF144AP50876 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.42□□□□□ -0.1
RNF144AP50876 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms