Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.53□□□□□ -0.24
GDNFP39905 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDNFP39905 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDNFP39905 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDNFP39905 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.53□□□□□ -0.24
GDNFP39905 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDNFP39905 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
GDNFP39905 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
GDNFP39905 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
GDNFP39905 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
GDNFP39905 REXO1L1P-202ENST00000608646 1974 ntBASIC13.52□□□□□ -0.24
GDNFP39905 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
GDNFP39905 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
GDNFP39905 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
GDNFP39905 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
GDNFP39905 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
GDNFP39905 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
GDNFP39905 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.24
GDNFP39905 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
GDNFP39905 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
GDNFP39905 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.24
GDNFP39905 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
GDNFP39905 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
GDNFP39905 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
GDNFP39905 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GDNFP39905 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GDNFP39905 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
GDNFP39905 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GDNFP39905 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GDNFP39905 AC002056.1-201ENST00000395613 760 ntBASIC13.52□□□□□ -0.25
GDNFP39905 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.52□□□□□ -0.25
GDNFP39905 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GDNFP39905 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
GDNFP39905 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
GDNFP39905 ALG1L5P-201ENST00000482043 771 ntBASIC13.52□□□□□ -0.25
GDNFP39905 KRT18P34-201ENST00000488218 1270 ntBASIC13.52□□□□□ -0.25
GDNFP39905 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.52□□□□□ -0.25
GDNFP39905 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.52□□□□□ -0.25
GDNFP39905 AC112191.1-201ENST00000523689 701 ntBASIC13.52□□□□□ -0.25
GDNFP39905 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.52□□□□□ -0.25
GDNFP39905 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.52□□□□□ -0.25
GDNFP39905 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.52□□□□□ -0.25
GDNFP39905 AC002347.1-201ENST00000569543 541 ntBASIC13.52□□□□□ -0.25
GDNFP39905 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13.52□□□□□ -0.25
GDNFP39905 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
GDNFP39905 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.52□□□□□ -0.25
GDNFP39905 AC092902.6-201ENST00000641783 218 ntBASIC13.52□□□□□ -0.25
GDNFP39905 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GDNFP39905 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GDNFP39905 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GDNFP39905 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
GDNFP39905 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GDNFP39905 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.52□□□□□ -0.25
GDNFP39905 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GDNFP39905 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GDNFP39905 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GDNFP39905 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.52□□□□□ -0.25
GDNFP39905 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GDNFP39905 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GDNFP39905 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GDNFP39905 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GDNFP39905 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.52□□□□□ -0.25
GDNFP39905 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.52□□□□□ -0.25
GDNFP39905 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GDNFP39905 AC107918.4-201ENST00000641966 3141 ntBASIC13.52□□□□□ -0.25
GDNFP39905 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GDNFP39905 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
GDNFP39905 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
GDNFP39905 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
GDNFP39905 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
GDNFP39905 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
GDNFP39905 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDNFP39905 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDNFP39905 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
GDNFP39905 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDNFP39905 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.51□□□□□ -0.25
GDNFP39905 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GDNFP39905 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDNFP39905 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
GDNFP39905 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
GDNFP39905 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDNFP39905 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDNFP39905 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GDNFP39905 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDNFP39905 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.51□□□□□ -0.25
GDNFP39905 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDNFP39905 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GDNFP39905 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
GDNFP39905 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.51□□□□□ -0.25
GDNFP39905 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GDNFP39905 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDNFP39905 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GDNFP39905 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GDNFP39905 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDNFP39905 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDNFP39905 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDNFP39905 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDNFP39905 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.51□□□□□ -0.25
GDNFP39905 MCCD1P2-201ENST00000423228 335 ntBASIC13.51□□□□□ -0.25
GDNFP39905 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms