Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KRT9P35527 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT9P35527 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KRT9P35527 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT9P35527 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT9P35527 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT9P35527 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT9P35527 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
KRT9P35527 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT9P35527 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT9P35527 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT9P35527 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
KRT9P35527 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT9P35527 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT9P35527 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.95■□□□□ 0.3
KRT9P35527 TSEN15P1-201ENST00000423257 515 ntBASIC16.95■□□□□ 0.3
KRT9P35527 FAM8A3P-201ENST00000427218 844 ntBASIC16.95■□□□□ 0.3
KRT9P35527 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.95■□□□□ 0.3
KRT9P35527 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.95■□□□□ 0.3
KRT9P35527 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.95■□□□□ 0.3
KRT9P35527 AC069262.1-201ENST00000539058 672 ntBASIC16.95■□□□□ 0.3
KRT9P35527 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT9P35527 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT9P35527 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KRT9P35527 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT9P35527 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
KRT9P35527 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT9P35527 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
KRT9P35527 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.95■□□□□ 0.3
KRT9P35527 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.95■□□□□ 0.3
KRT9P35527 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.95■□□□□ 0.3
KRT9P35527 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT9P35527 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT9P35527 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.95■□□□□ 0.3
KRT9P35527 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
KRT9P35527 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
KRT9P35527 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT9P35527 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.95■□□□□ 0.3
KRT9P35527 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KRT9P35527 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT9P35527 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.94■□□□□ 0.3
KRT9P35527 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.94■□□□□ 0.3
KRT9P35527 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT9P35527 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.94■□□□□ 0.3
KRT9P35527 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
KRT9P35527 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT9P35527 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT9P35527 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT9P35527 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.94■□□□□ 0.3
KRT9P35527 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
KRT9P35527 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT9P35527 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT9P35527 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT9P35527 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
KRT9P35527 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KRT9P35527 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT9P35527 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT9P35527 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
KRT9P35527 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
KRT9P35527 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT9P35527 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.94■□□□□ 0.3
KRT9P35527 AC109322.1-201ENST00000524499 1264 ntBASIC16.94■□□□□ 0.3
KRT9P35527 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.94■□□□□ 0.3
KRT9P35527 AC004449.1-201ENST00000564240 433 ntBASIC16.94■□□□□ 0.3
KRT9P35527 AL133215.2-201ENST00000609242 977 ntBASIC16.94■□□□□ 0.3
KRT9P35527 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.94■□□□□ 0.3
KRT9P35527 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
KRT9P35527 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.94■□□□□ 0.3
KRT9P35527 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KRT9P35527 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
KRT9P35527 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT9P35527 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.94■□□□□ 0.3
KRT9P35527 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.94■□□□□ 0.3
KRT9P35527 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KRT9P35527 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.94■□□□□ 0.3
KRT9P35527 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
KRT9P35527 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.94■□□□□ 0.3
KRT9P35527 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT9P35527 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
KRT9P35527 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT9P35527 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
KRT9P35527 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT9P35527 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.93■□□□□ 0.3
KRT9P35527 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT9P35527 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT9P35527 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT9P35527 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT9P35527 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
KRT9P35527 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.93■□□□□ 0.3
KRT9P35527 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
KRT9P35527 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
KRT9P35527 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.93■□□□□ 0.3
KRT9P35527 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT9P35527 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
KRT9P35527 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KRT9P35527 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
KRT9P35527 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KRT9P35527 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
KRT9P35527 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT9P35527 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms