Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHC1P29353 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHC1P29353 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHC1P29353 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SHC1P29353 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHC1P29353 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHC1P29353 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SHC1P29353 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHC1P29353 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.21□□□□□ -0.13
SHC1P29353 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.21□□□□□ -0.13
SHC1P29353 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHC1P29353 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SHC1P29353 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SHC1P29353 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHC1P29353 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.21□□□□□ -0.13
SHC1P29353 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHC1P29353 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.21□□□□□ -0.13
SHC1P29353 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHC1P29353 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHC1P29353 BTBD7P1-201ENST00000447253 1453 ntBASIC14.21□□□□□ -0.13
SHC1P29353 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHC1P29353 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SHC1P29353 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHC1P29353 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.21□□□□□ -0.13
SHC1P29353 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.21□□□□□ -0.13
SHC1P29353 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.21□□□□□ -0.13
SHC1P29353 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SHC1P29353 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.21□□□□□ -0.13
SHC1P29353 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.21□□□□□ -0.13
SHC1P29353 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.21□□□□□ -0.13
SHC1P29353 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.21□□□□□ -0.13
SHC1P29353 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.21□□□□□ -0.13
SHC1P29353 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
SHC1P29353 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
SHC1P29353 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.21□□□□□ -0.13
SHC1P29353 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.21□□□□□ -0.13
SHC1P29353 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.21□□□□□ -0.13
SHC1P29353 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHC1P29353 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SHC1P29353 AC112693.3-201ENST00000624819 1983 ntBASIC14.21□□□□□ -0.13
SHC1P29353 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHC1P29353 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SHC1P29353 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHC1P29353 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHC1P29353 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHC1P29353 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.21□□□□□ -0.14
SHC1P29353 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SHC1P29353 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SHC1P29353 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.21□□□□□ -0.14
SHC1P29353 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
SHC1P29353 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.21□□□□□ -0.14
SHC1P29353 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SHC1P29353 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SHC1P29353 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SHC1P29353 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.14
SHC1P29353 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.2□□□□□ -0.14
SHC1P29353 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SHC1P29353 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SHC1P29353 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SHC1P29353 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHC1P29353 AC007686.3-201ENST00000619017 3487 ntBASIC14.2□□□□□ -0.14
SHC1P29353 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
SHC1P29353 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.2□□□□□ -0.14
SHC1P29353 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SHC1P29353 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHC1P29353 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHC1P29353 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHC1P29353 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHC1P29353 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHC1P29353 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHC1P29353 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHC1P29353 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.2□□□□□ -0.14
SHC1P29353 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.2□□□□□ -0.14
SHC1P29353 AC002472.2-201ENST00000442739 958 ntBASIC14.2□□□□□ -0.14
SHC1P29353 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.2□□□□□ -0.14
SHC1P29353 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHC1P29353 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
SHC1P29353 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
SHC1P29353 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.2□□□□□ -0.14
SHC1P29353 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.2□□□□□ -0.14
SHC1P29353 LINC02560-201ENST00000596379 459 ntBASIC14.2□□□□□ -0.14
SHC1P29353 SRD5A3P1-201ENST00000603021 949 ntBASIC14.2□□□□□ -0.14
SHC1P29353 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.2□□□□□ -0.14
SHC1P29353 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.2□□□□□ -0.14
SHC1P29353 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
SHC1P29353 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.2□□□□□ -0.14
SHC1P29353 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHC1P29353 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SHC1P29353 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.2□□□□□ -0.14
SHC1P29353 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHC1P29353 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.2□□□□□ -0.14
SHC1P29353 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.2□□□□□ -0.14
SHC1P29353 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHC1P29353 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SHC1P29353 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.2□□□□□ -0.14
SHC1P29353 LINC01101-201ENST00000622953 1884 ntBASIC14.2□□□□□ -0.14
SHC1P29353 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SHC1P29353 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHC1P29353 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SHC1P29353 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms