Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.99□□□□□ -0.33
LMO1P25800 AC004461.2-201ENST00000629517 803 ntBASIC12.99□□□□□ -0.33
LMO1P25800 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC12.99□□□□□ -0.33
LMO1P25800 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LMO1P25800 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.99□□□□□ -0.33
LMO1P25800 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LMO1P25800 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.99□□□□□ -0.33
LMO1P25800 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LMO1P25800 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.99□□□□□ -0.33
LMO1P25800 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
LMO1P25800 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
LMO1P25800 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.99□□□□□ -0.33
LMO1P25800 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LMO1P25800 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
LMO1P25800 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LMO1P25800 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LMO1P25800 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LMO1P25800 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.98□□□□□ -0.33
LMO1P25800 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
LMO1P25800 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.98□□□□□ -0.33
LMO1P25800 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.98□□□□□ -0.33
LMO1P25800 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
LMO1P25800 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LMO1P25800 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.98□□□□□ -0.33
LMO1P25800 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LMO1P25800 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
LMO1P25800 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LMO1P25800 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LMO1P25800 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LMO1P25800 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LMO1P25800 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.98□□□□□ -0.33
LMO1P25800 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
LMO1P25800 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LMO1P25800 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LMO1P25800 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
LMO1P25800 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
LMO1P25800 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LMO1P25800 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC12.98□□□□□ -0.33
LMO1P25800 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.98□□□□□ -0.33
LMO1P25800 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LMO1P25800 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
LMO1P25800 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.98□□□□□ -0.33
LMO1P25800 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC12.98□□□□□ -0.33
LMO1P25800 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.98□□□□□ -0.33
LMO1P25800 AC055876.3-201ENST00000431496 288 ntBASIC12.98□□□□□ -0.33
LMO1P25800 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.98□□□□□ -0.33
LMO1P25800 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
LMO1P25800 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC12.98□□□□□ -0.33
LMO1P25800 DUX4L27-201ENST00000554796 1261 ntBASIC12.98□□□□□ -0.33
LMO1P25800 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LMO1P25800 AC009407.1-201ENST00000568958 598 ntBASIC12.98□□□□□ -0.33
LMO1P25800 AC138649.4-201ENST00000612222 287 ntBASIC12.98□□□□□ -0.33
LMO1P25800 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.98□□□□□ -0.33
LMO1P25800 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
LMO1P25800 ORC5-208ENST00000626700 344 ntTSL 3 BASIC12.98□□□□□ -0.33
LMO1P25800 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
LMO1P25800 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LMO1P25800 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LMO1P25800 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LMO1P25800 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LMO1P25800 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.98□□□□□ -0.33
LMO1P25800 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
LMO1P25800 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.98□□□□□ -0.33
LMO1P25800 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LMO1P25800 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LMO1P25800 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LMO1P25800 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LMO1P25800 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LMO1P25800 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.98□□□□□ -0.33
LMO1P25800 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LMO1P25800 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LMO1P25800 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LMO1P25800 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
LMO1P25800 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LMO1P25800 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LMO1P25800 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO1P25800 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LMO1P25800 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
LMO1P25800 AC005252.3-201ENST00000623855 2258 ntBASIC12.97□□□□□ -0.33
LMO1P25800 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
LMO1P25800 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
LMO1P25800 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO1P25800 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
LMO1P25800 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
LMO1P25800 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO1P25800 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO1P25800 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.97□□□□□ -0.33
LMO1P25800 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO1P25800 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
LMO1P25800 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LMO1P25800 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO1P25800 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LMO1P25800 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LMO1P25800 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO1P25800 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO1P25800 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO1P25800 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC12.97□□□□□ -0.33
LMO1P25800 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.97□□□□□ -0.33
LMO1P25800 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.97□□□□□ -0.33
LMO1P25800 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms