Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.26□□□□□ -0.29
TNFSF4P23510 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.26□□□□□ -0.29
TNFSF4P23510 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TNFSF4P23510 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TNFSF4P23510 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TNFSF4P23510 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TNFSF4P23510 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TNFSF4P23510 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TNFSF4P23510 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TNFSF4P23510 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
TNFSF4P23510 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.26□□□□□ -0.29
TNFSF4P23510 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TNFSF4P23510 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TNFSF4P23510 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TNFSF4P23510 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TNFSF4P23510 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TNFSF4P23510 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TNFSF4P23510 CICP13-201ENST00000422015 2789 ntBASIC13.26□□□□□ -0.29
TNFSF4P23510 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TNFSF4P23510 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TNFSF4P23510 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.26□□□□□ -0.29
TNFSF4P23510 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.26□□□□□ -0.29
TNFSF4P23510 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TNFSF4P23510 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TNFSF4P23510 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.26□□□□□ -0.29
TNFSF4P23510 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.26□□□□□ -0.29
TNFSF4P23510 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
TNFSF4P23510 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.26□□□□□ -0.29
TNFSF4P23510 TP53TG3HP-202ENST00000569755 579 ntBASIC13.26□□□□□ -0.29
TNFSF4P23510 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.26□□□□□ -0.29
TNFSF4P23510 AC000095.1-201ENST00000603208 874 ntBASIC13.26□□□□□ -0.29
TNFSF4P23510 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.26□□□□□ -0.29
TNFSF4P23510 AL662799.1-202ENST00000614205 422 ntBASIC13.26□□□□□ -0.29
TNFSF4P23510 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
TNFSF4P23510 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TNFSF4P23510 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TNFSF4P23510 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TNFSF4P23510 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
TNFSF4P23510 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TNFSF4P23510 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TNFSF4P23510 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TNFSF4P23510 LINC02228-204ENST00000642115 2962 ntBASIC13.26□□□□□ -0.29
TNFSF4P23510 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TNFSF4P23510 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TNFSF4P23510 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.26□□□□□ -0.29
TNFSF4P23510 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TNFSF4P23510 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TNFSF4P23510 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.25□□□□□ -0.29
TNFSF4P23510 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFSF4P23510 AC092127.1-201ENST00000567093 3455 ntBASIC13.25□□□□□ -0.29
TNFSF4P23510 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TNFSF4P23510 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TNFSF4P23510 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFSF4P23510 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.25□□□□□ -0.29
TNFSF4P23510 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFSF4P23510 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFSF4P23510 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TNFSF4P23510 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TNFSF4P23510 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFSF4P23510 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFSF4P23510 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.25□□□□□ -0.29
TNFSF4P23510 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFSF4P23510 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFSF4P23510 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFSF4P23510 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFSF4P23510 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.25□□□□□ -0.29
TNFSF4P23510 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TNFSF4P23510 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.25□□□□□ -0.29
TNFSF4P23510 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.25□□□□□ -0.29
TNFSF4P23510 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.25□□□□□ -0.29
TNFSF4P23510 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.25□□□□□ -0.29
TNFSF4P23510 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.25□□□□□ -0.29
TNFSF4P23510 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.25□□□□□ -0.29
TNFSF4P23510 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.25□□□□□ -0.29
TNFSF4P23510 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.25□□□□□ -0.29
TNFSF4P23510 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
TNFSF4P23510 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.25□□□□□ -0.29
TNFSF4P23510 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TNFSF4P23510 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TNFSF4P23510 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.25□□□□□ -0.29
TNFSF4P23510 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.25□□□□□ -0.29
TNFSF4P23510 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFSF4P23510 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.25□□□□□ -0.29
TNFSF4P23510 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TNFSF4P23510 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
TNFSF4P23510 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFSF4P23510 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.25□□□□□ -0.29
TNFSF4P23510 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFSF4P23510 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFSF4P23510 AC092053.3-201ENST00000641308 4975 ntBASIC13.25□□□□□ -0.29
TNFSF4P23510 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFSF4P23510 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.25□□□□□ -0.29
TNFSF4P23510 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFSF4P23510 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFSF4P23510 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFSF4P23510 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TNFSF4P23510 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
TNFSF4P23510 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.25□□□□□ -0.29
TNFSF4P23510 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.25□□□□□ -0.29
TNFSF4P23510 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms