Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ERCC3P19447 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
ERCC3P19447 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
ERCC3P19447 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
ERCC3P19447 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
ERCC3P19447 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ERCC3P19447 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ERCC3P19447 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.89■□□□□ 0.45
ERCC3P19447 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ERCC3P19447 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.89■□□□□ 0.45
ERCC3P19447 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
ERCC3P19447 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
ERCC3P19447 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ERCC3P19447 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.89■□□□□ 0.45
ERCC3P19447 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.89■□□□□ 0.45
ERCC3P19447 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
ERCC3P19447 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
ERCC3P19447 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
ERCC3P19447 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ERCC3P19447 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ERCC3P19447 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.89■□□□□ 0.45
ERCC3P19447 CNN2P8-201ENST00000421872 913 ntBASIC17.89■□□□□ 0.45
ERCC3P19447 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
ERCC3P19447 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ERCC3P19447 AC245100.3-201ENST00000441281 285 ntBASIC17.89■□□□□ 0.45
ERCC3P19447 AC099548.2-209ENST00000480264 625 ntBASIC17.89■□□□□ 0.45
ERCC3P19447 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.89■□□□□ 0.45
ERCC3P19447 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ERCC3P19447 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.89■□□□□ 0.45
ERCC3P19447 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.89■□□□□ 0.45
ERCC3P19447 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.89■□□□□ 0.45
ERCC3P19447 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.89■□□□□ 0.45
ERCC3P19447 RN7SL560P-201ENST00000577943 264 ntBASIC17.89■□□□□ 0.45
ERCC3P19447 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.89■□□□□ 0.45
ERCC3P19447 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.89■□□□□ 0.45
ERCC3P19447 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ERCC3P19447 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ERCC3P19447 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.89■□□□□ 0.45
ERCC3P19447 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ERCC3P19447 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ERCC3P19447 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ERCC3P19447 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ERCC3P19447 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ERCC3P19447 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC3P19447 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
ERCC3P19447 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC3P19447 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
ERCC3P19447 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC3P19447 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC3P19447 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC3P19447 AC011477.6-201ENST00000604980 1927 ntBASIC17.88■□□□□ 0.45
ERCC3P19447 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC3P19447 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC3P19447 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC3P19447 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.88■□□□□ 0.45
ERCC3P19447 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC3P19447 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC3P19447 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.88■□□□□ 0.45
ERCC3P19447 LINC02447-202ENST00000501888 2146 ntBASIC17.88■□□□□ 0.45
ERCC3P19447 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.88■□□□□ 0.45
ERCC3P19447 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.88■□□□□ 0.45
ERCC3P19447 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC3P19447 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.88■□□□□ 0.45
ERCC3P19447 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.88■□□□□ 0.45
ERCC3P19447 DUX4L45-201ENST00000566406 1057 ntBASIC17.88■□□□□ 0.45
ERCC3P19447 AC025279.2-201ENST00000569730 653 ntBASIC17.88■□□□□ 0.45
ERCC3P19447 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.88■□□□□ 0.45
ERCC3P19447 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.88■□□□□ 0.45
ERCC3P19447 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
ERCC3P19447 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
ERCC3P19447 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC3P19447 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.88■□□□□ 0.45
ERCC3P19447 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC3P19447 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.88■□□□□ 0.45
ERCC3P19447 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC3P19447 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC3P19447 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
ERCC3P19447 DBET-201ENST00000630918 3363 ntBASIC17.88■□□□□ 0.45
ERCC3P19447 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC3P19447 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
ERCC3P19447 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC3P19447 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.88■□□□□ 0.45
ERCC3P19447 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC3P19447 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC3P19447 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC3P19447 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC3P19447 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.87■□□□□ 0.45
ERCC3P19447 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.87■□□□□ 0.45
ERCC3P19447 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC3P19447 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC3P19447 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC3P19447 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC3P19447 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC3P19447 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC3P19447 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC3P19447 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC3P19447 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC3P19447 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC3P19447 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.87■□□□□ 0.45
ERCC3P19447 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms