Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CD48P09326 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD48P09326 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16■□□□□ 0.15
CD48P09326 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16■□□□□ 0.15
CD48P09326 AC104457.1-201ENST00000401024 814 ntBASIC16■□□□□ 0.15
CD48P09326 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CD48P09326 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16■□□□□ 0.15
CD48P09326 GNAQP1-201ENST00000444815 1067 ntBASIC16■□□□□ 0.15
CD48P09326 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16■□□□□ 0.15
CD48P09326 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16■□□□□ 0.15
CD48P09326 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16■□□□□ 0.15
CD48P09326 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16■□□□□ 0.15
CD48P09326 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16■□□□□ 0.15
CD48P09326 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16■□□□□ 0.15
CD48P09326 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16■□□□□ 0.15
CD48P09326 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD48P09326 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD48P09326 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16■□□□□ 0.15
CD48P09326 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CD48P09326 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16■□□□□ 0.15
CD48P09326 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16■□□□□ 0.15
CD48P09326 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
CD48P09326 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CD48P09326 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16■□□□□ 0.15
CD48P09326 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16■□□□□ 0.15
CD48P09326 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CD48P09326 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CD48P09326 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD48P09326 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD48P09326 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
CD48P09326 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.99■□□□□ 0.15
CD48P09326 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD48P09326 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.99■□□□□ 0.15
CD48P09326 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CD48P09326 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CD48P09326 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD48P09326 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD48P09326 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.99■□□□□ 0.15
CD48P09326 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.99■□□□□ 0.15
CD48P09326 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD48P09326 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CD48P09326 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.99■□□□□ 0.15
CD48P09326 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.99■□□□□ 0.15
CD48P09326 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.99■□□□□ 0.15
CD48P09326 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.99■□□□□ 0.15
CD48P09326 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CD48P09326 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.99■□□□□ 0.15
CD48P09326 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CD48P09326 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.99■□□□□ 0.15
CD48P09326 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD48P09326 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD48P09326 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD48P09326 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.99■□□□□ 0.15
CD48P09326 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.99■□□□□ 0.15
CD48P09326 LINC01101-201ENST00000622953 1884 ntBASIC15.99■□□□□ 0.15
CD48P09326 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CD48P09326 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD48P09326 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD48P09326 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CD48P09326 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
CD48P09326 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD48P09326 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD48P09326 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD48P09326 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD48P09326 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD48P09326 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD48P09326 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD48P09326 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CD48P09326 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CD48P09326 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CD48P09326 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD48P09326 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD48P09326 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD48P09326 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CD48P09326 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD48P09326 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD48P09326 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.98■□□□□ 0.15
CD48P09326 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.98■□□□□ 0.15
CD48P09326 DOC2GP-202ENST00000514950 1163 ntBASIC15.98■□□□□ 0.15
CD48P09326 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
CD48P09326 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.98■□□□□ 0.15
CD48P09326 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.98■□□□□ 0.15
CD48P09326 AC027796.2-201ENST00000575326 344 ntBASIC15.98■□□□□ 0.15
CD48P09326 AL645728.2-202ENST00000641679 227 ntBASIC15.98■□□□□ 0.15
CD48P09326 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD48P09326 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.98■□□□□ 0.15
CD48P09326 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.98■□□□□ 0.15
CD48P09326 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD48P09326 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD48P09326 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CD48P09326 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD48P09326 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD48P09326 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD48P09326 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.97■□□□□ 0.15
CD48P09326 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CD48P09326 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
CD48P09326 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD48P09326 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.97■□□□□ 0.15
CD48P09326 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CD48P09326 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms