Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC244669.2-201ENST00000612320 853 ntBASIC14.53□□□□□ -0.08
PDGFAP04085 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.53□□□□□ -0.08
PDGFAP04085 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.53□□□□□ -0.08
PDGFAP04085 AC009542.2-202ENST00000619004 1067 ntBASIC14.53□□□□□ -0.08
PDGFAP04085 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.53□□□□□ -0.08
PDGFAP04085 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFAP04085 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.53□□□□□ -0.08
PDGFAP04085 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFAP04085 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.53□□□□□ -0.08
PDGFAP04085 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFAP04085 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.53□□□□□ -0.08
PDGFAP04085 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFAP04085 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFAP04085 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFAP04085 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFAP04085 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PDGFAP04085 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PDGFAP04085 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.52□□□□□ -0.08
PDGFAP04085 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.52□□□□□ -0.08
PDGFAP04085 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PDGFAP04085 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PDGFAP04085 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.52□□□□□ -0.08
PDGFAP04085 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PDGFAP04085 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PDGFAP04085 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PDGFAP04085 BNIP3P1-202ENST00000550043 1585 ntBASIC14.52□□□□□ -0.08
PDGFAP04085 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.52□□□□□ -0.08
PDGFAP04085 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PDGFAP04085 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PDGFAP04085 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
PDGFAP04085 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.52□□□□□ -0.08
PDGFAP04085 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
PDGFAP04085 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PDGFAP04085 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.52□□□□□ -0.08
PDGFAP04085 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.52□□□□□ -0.08
PDGFAP04085 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PDGFAP04085 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
PDGFAP04085 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PDGFAP04085 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDGFAP04085 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.52□□□□□ -0.09
PDGFAP04085 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
PDGFAP04085 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDGFAP04085 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PDGFAP04085 SOCS2P1-201ENST00000417727 557 ntBASIC14.52□□□□□ -0.09
PDGFAP04085 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.52□□□□□ -0.09
PDGFAP04085 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.52□□□□□ -0.09
PDGFAP04085 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.52□□□□□ -0.09
PDGFAP04085 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.52□□□□□ -0.09
PDGFAP04085 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.52□□□□□ -0.09
PDGFAP04085 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.52□□□□□ -0.09
PDGFAP04085 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.52□□□□□ -0.09
PDGFAP04085 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.52□□□□□ -0.09
PDGFAP04085 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.52□□□□□ -0.09
PDGFAP04085 AC106760.1-201ENST00000508690 800 ntBASIC14.52□□□□□ -0.09
PDGFAP04085 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.52□□□□□ -0.09
PDGFAP04085 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.52□□□□□ -0.09
PDGFAP04085 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.52□□□□□ -0.09
PDGFAP04085 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.52□□□□□ -0.09
PDGFAP04085 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.52□□□□□ -0.09
PDGFAP04085 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.52□□□□□ -0.09
PDGFAP04085 ENPP7P5-201ENST00000541031 1031 ntBASIC14.52□□□□□ -0.09
PDGFAP04085 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.52□□□□□ -0.09
PDGFAP04085 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.52□□□□□ -0.09
PDGFAP04085 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PDGFAP04085 AC243562.2-201ENST00000561247 970 ntBASIC14.52□□□□□ -0.09
PDGFAP04085 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.52□□□□□ -0.09
PDGFAP04085 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PDGFAP04085 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
PDGFAP04085 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDGFAP04085 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
PDGFAP04085 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
PDGFAP04085 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.52□□□□□ -0.09
PDGFAP04085 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDGFAP04085 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.52□□□□□ -0.09
PDGFAP04085 AL359258.3-201ENST00000622910 2331 ntBASIC14.52□□□□□ -0.09
PDGFAP04085 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDGFAP04085 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.51□□□□□ -0.09
PDGFAP04085 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.51□□□□□ -0.09
PDGFAP04085 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFAP04085 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFAP04085 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFAP04085 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFAP04085 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFAP04085 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFAP04085 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFAP04085 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFAP04085 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFAP04085 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFAP04085 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFAP04085 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.51□□□□□ -0.09
PDGFAP04085 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFAP04085 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFAP04085 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PDGFAP04085 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.51□□□□□ -0.09
PDGFAP04085 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
PDGFAP04085 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFAP04085 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFAP04085 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFAP04085 C1QBPP1-201ENST00000400117 770 ntBASIC14.51□□□□□ -0.09
PDGFAP04085 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms