Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SIX6O95475 BNIP3P1-202ENST00000550043 1585 ntBASIC12.99□□□□□ -0.33
SIX6O95475 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.99□□□□□ -0.33
SIX6O95475 AL589702.1-201ENST00000641229 1509 ntBASIC12.99□□□□□ -0.33
SIX6O95475 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SIX6O95475 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SIX6O95475 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SIX6O95475 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SIX6O95475 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.99□□□□□ -0.33
SIX6O95475 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SIX6O95475 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SIX6O95475 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SIX6O95475 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SIX6O95475 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC12.99□□□□□ -0.33
SIX6O95475 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SIX6O95475 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.99□□□□□ -0.33
SIX6O95475 BET1L-206ENST00000486280 665 ntTSL 3 BASIC12.99□□□□□ -0.33
SIX6O95475 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC12.99□□□□□ -0.33
SIX6O95475 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SIX6O95475 TPSP2-201ENST00000561760 610 ntBASIC12.99□□□□□ -0.33
SIX6O95475 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC12.99□□□□□ -0.33
SIX6O95475 AL805961.1-202ENST00000641562 540 ntBASIC12.99□□□□□ -0.33
SIX6O95475 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.99□□□□□ -0.33
SIX6O95475 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SIX6O95475 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
SIX6O95475 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SIX6O95475 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.99□□□□□ -0.33
SIX6O95475 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.99□□□□□ -0.33
SIX6O95475 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.99□□□□□ -0.33
SIX6O95475 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SIX6O95475 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SIX6O95475 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.99□□□□□ -0.33
SIX6O95475 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SIX6O95475 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.99□□□□□ -0.33
SIX6O95475 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SIX6O95475 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SIX6O95475 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SIX6O95475 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SIX6O95475 NUTM2HP-201ENST00000442076 2498 ntBASIC12.99□□□□□ -0.33
SIX6O95475 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SIX6O95475 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SIX6O95475 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SIX6O95475 AL118506.1-201ENST00000601296 3082 ntBASIC12.99□□□□□ -0.33
SIX6O95475 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SIX6O95475 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SIX6O95475 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SIX6O95475 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SIX6O95475 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
SIX6O95475 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
SIX6O95475 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SIX6O95475 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.98□□□□□ -0.33
SIX6O95475 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SIX6O95475 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SIX6O95475 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC12.98□□□□□ -0.33
SIX6O95475 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.98□□□□□ -0.33
SIX6O95475 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SIX6O95475 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SIX6O95475 AC015802.1-201ENST00000588104 1449 ntBASIC12.98□□□□□ -0.33
SIX6O95475 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SIX6O95475 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
SIX6O95475 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.98□□□□□ -0.33
SIX6O95475 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SIX6O95475 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SIX6O95475 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
SIX6O95475 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
SIX6O95475 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.98□□□□□ -0.33
SIX6O95475 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SIX6O95475 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
SIX6O95475 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SIX6O95475 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.98□□□□□ -0.33
SIX6O95475 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.98□□□□□ -0.33
SIX6O95475 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SIX6O95475 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SIX6O95475 ELK2BP-201ENST00000415014 1224 ntBASIC12.98□□□□□ -0.33
SIX6O95475 KRT18P57-201ENST00000443599 1254 ntBASIC12.98□□□□□ -0.33
SIX6O95475 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SIX6O95475 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC12.98□□□□□ -0.33
SIX6O95475 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC12.98□□□□□ -0.33
SIX6O95475 CIB2-208ENST00000560618 804 ntTSL 2 BASIC12.98□□□□□ -0.33
SIX6O95475 SDCCAG3P1-201ENST00000589292 1150 ntBASIC12.98□□□□□ -0.33
SIX6O95475 AC005363.2-201ENST00000618631 242 ntBASIC12.98□□□□□ -0.33
SIX6O95475 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC12.98□□□□□ -0.33
SIX6O95475 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC12.98□□□□□ -0.33
SIX6O95475 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SIX6O95475 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SIX6O95475 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SIX6O95475 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.98□□□□□ -0.33
SIX6O95475 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.98□□□□□ -0.33
SIX6O95475 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SIX6O95475 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SIX6O95475 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SIX6O95475 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
SIX6O95475 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC12.98□□□□□ -0.33
SIX6O95475 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.98□□□□□ -0.33
SIX6O95475 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
SIX6O95475 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SIX6O95475 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.98□□□□□ -0.33
SIX6O95475 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SIX6O95475 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
SIX6O95475 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms