Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM3O75382 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TRIM3O75382 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM3O75382 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM3O75382 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM3O75382 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.48□□□□□ -0.09
TRIM3O75382 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM3O75382 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM3O75382 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM3O75382 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRIM3O75382 SPDYE19P-201ENST00000338590 713 ntBASIC14.48□□□□□ -0.09
TRIM3O75382 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.48□□□□□ -0.09
TRIM3O75382 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TRIM3O75382 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRIM3O75382 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM3O75382 TARDBPP1-201ENST00000442013 1203 ntBASIC14.48□□□□□ -0.09
TRIM3O75382 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM3O75382 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.48□□□□□ -0.09
TRIM3O75382 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.48□□□□□ -0.09
TRIM3O75382 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM3O75382 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.48□□□□□ -0.09
TRIM3O75382 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TRIM3O75382 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM3O75382 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM3O75382 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM3O75382 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.48□□□□□ -0.09
TRIM3O75382 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM3O75382 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM3O75382 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM3O75382 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM3O75382 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM3O75382 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM3O75382 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TRIM3O75382 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TRIM3O75382 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM3O75382 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TRIM3O75382 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM3O75382 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM3O75382 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.47□□□□□ -0.09
TRIM3O75382 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM3O75382 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM3O75382 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM3O75382 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM3O75382 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM3O75382 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM3O75382 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM3O75382 LINC01101-201ENST00000622953 1884 ntBASIC14.47□□□□□ -0.09
TRIM3O75382 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TRIM3O75382 AC007541.1-201ENST00000570282 1469 ntBASIC14.47□□□□□ -0.09
TRIM3O75382 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM3O75382 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM3O75382 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM3O75382 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM3O75382 AC074338.1-201ENST00000416825 156 ntBASIC14.47□□□□□ -0.09
TRIM3O75382 AC136604.1-201ENST00000418535 575 ntBASIC14.47□□□□□ -0.09
TRIM3O75382 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.47□□□□□ -0.09
TRIM3O75382 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.47□□□□□ -0.09
TRIM3O75382 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM3O75382 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM3O75382 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM3O75382 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.47□□□□□ -0.09
TRIM3O75382 HNRNPUP1-201ENST00000554987 333 ntBASIC14.47□□□□□ -0.09
TRIM3O75382 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.47□□□□□ -0.09
TRIM3O75382 SPDYE22P-201ENST00000582158 798 ntBASIC14.47□□□□□ -0.09
TRIM3O75382 AL132655.2-201ENST00000596276 594 ntBASIC14.47□□□□□ -0.09
TRIM3O75382 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.47□□□□□ -0.09
TRIM3O75382 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.47□□□□□ -0.09
TRIM3O75382 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM3O75382 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM3O75382 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
TRIM3O75382 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM3O75382 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM3O75382 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRIM3O75382 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM3O75382 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRIM3O75382 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
TRIM3O75382 PRAL-201ENST00000624952 3286 ntBASIC14.47□□□□□ -0.09
TRIM3O75382 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM3O75382 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM3O75382 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM3O75382 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM3O75382 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM3O75382 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRIM3O75382 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM3O75382 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.46□□□□□ -0.09
TRIM3O75382 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM3O75382 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM3O75382 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM3O75382 MYO15B-237ENST00000642007 4893 ntBASIC14.46□□□□□ -0.09
TRIM3O75382 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
TRIM3O75382 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM3O75382 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM3O75382 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM3O75382 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM3O75382 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM3O75382 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRIM3O75382 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRIM3O75382 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM3O75382 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM3O75382 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms