Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 AP001005.1-201ENST00000571755 1248 ntBASIC12.13□□□□□ -0.47
ZNF253O75346 AC061975.2-201ENST00000581722 295 ntBASIC12.13□□□□□ -0.47
ZNF253O75346 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
ZNF253O75346 AC068137.2-201ENST00000605408 478 ntBASIC12.13□□□□□ -0.47
ZNF253O75346 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.13□□□□□ -0.47
ZNF253O75346 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.13□□□□□ -0.47
ZNF253O75346 AL031008.1-201ENST00000619963 541 ntBASIC12.13□□□□□ -0.47
ZNF253O75346 AL691432.3-201ENST00000621860 400 ntBASIC12.13□□□□□ -0.47
ZNF253O75346 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
ZNF253O75346 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF253O75346 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF253O75346 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.13□□□□□ -0.47
ZNF253O75346 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.13□□□□□ -0.47
ZNF253O75346 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
ZNF253O75346 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF253O75346 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF253O75346 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
ZNF253O75346 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.13□□□□□ -0.47
ZNF253O75346 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF253O75346 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.13□□□□□ -0.47
ZNF253O75346 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 BCAR1-209ENST00000546196 1340 ntBASIC12.12□□□□□ -0.47
ZNF253O75346 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.12□□□□□ -0.47
ZNF253O75346 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.12□□□□□ -0.47
ZNF253O75346 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
ZNF253O75346 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.12□□□□□ -0.47
ZNF253O75346 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.12□□□□□ -0.47
ZNF253O75346 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
ZNF253O75346 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.12□□□□□ -0.47
ZNF253O75346 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.12□□□□□ -0.47
ZNF253O75346 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.12□□□□□ -0.47
ZNF253O75346 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
ZNF253O75346 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.12□□□□□ -0.47
ZNF253O75346 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
ZNF253O75346 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.12□□□□□ -0.47
ZNF253O75346 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.12□□□□□ -0.47
ZNF253O75346 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.12□□□□□ -0.47
ZNF253O75346 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
ZNF253O75346 AC112191.1-201ENST00000523689 701 ntBASIC12.12□□□□□ -0.47
ZNF253O75346 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.12□□□□□ -0.47
ZNF253O75346 KRT19P2-202ENST00000557173 1012 ntBASIC12.12□□□□□ -0.47
ZNF253O75346 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC12.12□□□□□ -0.47
ZNF253O75346 AL049840.3-201ENST00000602669 611 ntBASIC12.12□□□□□ -0.47
ZNF253O75346 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 SPTSSB-204ENST00000617024 1292 ntBASIC12.12□□□□□ -0.47
ZNF253O75346 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.12□□□□□ -0.47
ZNF253O75346 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.12□□□□□ -0.47
ZNF253O75346 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.12□□□□□ -0.47
ZNF253O75346 AC004877.2-201ENST00000623941 599 ntBASIC12.12□□□□□ -0.47
ZNF253O75346 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC12.12□□□□□ -0.47
ZNF253O75346 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.12□□□□□ -0.47
ZNF253O75346 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.12□□□□□ -0.47
ZNF253O75346 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
ZNF253O75346 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
ZNF253O75346 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF253O75346 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
ZNF253O75346 AKAP8P1-201ENST00000434743 1349 ntBASIC12.11□□□□□ -0.47
ZNF253O75346 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
ZNF253O75346 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF253O75346 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF253O75346 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF253O75346 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
ZNF253O75346 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.11□□□□□ -0.47
ZNF253O75346 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
ZNF253O75346 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF253O75346 LINC01230-201ENST00000625222 3017 ntBASIC12.11□□□□□ -0.47
ZNF253O75346 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF253O75346 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms