Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.77□□□□□ -0.21
PFDN1O60925 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PFDN1O60925 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.77□□□□□ -0.21
PFDN1O60925 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PFDN1O60925 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PFDN1O60925 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PFDN1O60925 AC099521.2-201ENST00000619354 2036 ntBASIC13.76□□□□□ -0.21
PFDN1O60925 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
PFDN1O60925 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC13.76□□□□□ -0.21
PFDN1O60925 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PFDN1O60925 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
PFDN1O60925 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PFDN1O60925 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC13.76□□□□□ -0.21
PFDN1O60925 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.76□□□□□ -0.21
PFDN1O60925 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
PFDN1O60925 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PFDN1O60925 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PFDN1O60925 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC13.76□□□□□ -0.21
PFDN1O60925 WASH3P-207ENST00000560956 1394 ntBASIC13.76□□□□□ -0.21
PFDN1O60925 FO538757.1-201ENST00000623083 1397 ntBASIC13.76□□□□□ -0.21
PFDN1O60925 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PFDN1O60925 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PFDN1O60925 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PFDN1O60925 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PFDN1O60925 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC13.76□□□□□ -0.21
PFDN1O60925 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC13.76□□□□□ -0.21
PFDN1O60925 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC13.76□□□□□ -0.21
PFDN1O60925 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PFDN1O60925 ETFA-216ENST00000560726 942 ntTSL 3 BASIC13.76□□□□□ -0.21
PFDN1O60925 SLC25A1P4-201ENST00000567977 778 ntBASIC13.76□□□□□ -0.21
PFDN1O60925 AC005332.3-201ENST00000589904 676 ntBASIC13.76□□□□□ -0.21
PFDN1O60925 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
PFDN1O60925 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
PFDN1O60925 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.76□□□□□ -0.21
PFDN1O60925 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PFDN1O60925 AC107375.1-201ENST00000564464 2231 ntBASIC13.76□□□□□ -0.21
PFDN1O60925 AC023794.5-201ENST00000564380 2157 ntBASIC13.76□□□□□ -0.21
PFDN1O60925 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PFDN1O60925 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PFDN1O60925 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PFDN1O60925 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PFDN1O60925 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PFDN1O60925 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
PFDN1O60925 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PFDN1O60925 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.76□□□□□ -0.21
PFDN1O60925 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
PFDN1O60925 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
PFDN1O60925 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PFDN1O60925 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.76□□□□□ -0.21
PFDN1O60925 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC13.76□□□□□ -0.21
PFDN1O60925 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.76□□□□□ -0.21
PFDN1O60925 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PFDN1O60925 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC13.76□□□□□ -0.21
PFDN1O60925 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC13.76□□□□□ -0.21
PFDN1O60925 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
PFDN1O60925 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC13.75□□□□□ -0.21
PFDN1O60925 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
PFDN1O60925 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC13.75□□□□□ -0.21
PFDN1O60925 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
PFDN1O60925 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC13.75□□□□□ -0.21
PFDN1O60925 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.75□□□□□ -0.21
PFDN1O60925 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.75□□□□□ -0.21
PFDN1O60925 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
PFDN1O60925 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC13.75□□□□□ -0.21
PFDN1O60925 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC13.75□□□□□ -0.21
PFDN1O60925 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
PFDN1O60925 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 PON3-205ENST00000451904 1053 ntTSL 3 BASIC13.75□□□□□ -0.21
PFDN1O60925 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.75□□□□□ -0.21
PFDN1O60925 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
PFDN1O60925 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
PFDN1O60925 AC009154.2-201ENST00000621177 724 ntBASIC13.75□□□□□ -0.21
PFDN1O60925 AL023875.1-201ENST00000640777 796 ntBASIC13.75□□□□□ -0.21
PFDN1O60925 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PFDN1O60925 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms