Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC11.66□□□□□ -0.54
SNAI2O43623 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC11.66□□□□□ -0.54
SNAI2O43623 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC11.66□□□□□ -0.54
SNAI2O43623 ZBTB45P2-201ENST00000452245 1531 ntBASIC11.65□□□□□ -0.54
SNAI2O43623 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
SNAI2O43623 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SNAI2O43623 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC11.65□□□□□ -0.54
SNAI2O43623 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SNAI2O43623 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
SNAI2O43623 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC11.65□□□□□ -0.54
SNAI2O43623 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SNAI2O43623 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SNAI2O43623 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC11.65□□□□□ -0.54
SNAI2O43623 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
SNAI2O43623 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SNAI2O43623 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
SNAI2O43623 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
SNAI2O43623 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
SNAI2O43623 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SNAI2O43623 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
SNAI2O43623 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SNAI2O43623 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC11.65□□□□□ -0.54
SNAI2O43623 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
SNAI2O43623 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SNAI2O43623 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC11.65□□□□□ -0.54
SNAI2O43623 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
SNAI2O43623 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC11.65□□□□□ -0.54
SNAI2O43623 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC11.65□□□□□ -0.54
SNAI2O43623 METTL26-205ENST00000397666 726 ntTSL 2 BASIC11.65□□□□□ -0.54
SNAI2O43623 SLC4A1APP2-201ENST00000424054 1259 ntBASIC11.65□□□□□ -0.54
SNAI2O43623 AC018712.1-201ENST00000455767 687 ntBASIC11.65□□□□□ -0.54
SNAI2O43623 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
SNAI2O43623 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC11.65□□□□□ -0.54
SNAI2O43623 PRYP6-201ENST00000514804 343 ntBASIC11.65□□□□□ -0.54
SNAI2O43623 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC11.65□□□□□ -0.54
SNAI2O43623 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SNAI2O43623 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
SNAI2O43623 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC11.65□□□□□ -0.54
SNAI2O43623 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
SNAI2O43623 MIR4313-201ENST00000580760 101 ntBASIC11.65□□□□□ -0.54
SNAI2O43623 TBCB-205ENST00000585746 875 ntTSL 3 BASIC11.65□□□□□ -0.54
SNAI2O43623 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SNAI2O43623 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
SNAI2O43623 TP73-AS1-207ENST00000624167 988 ntBASIC11.65□□□□□ -0.54
SNAI2O43623 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC11.65□□□□□ -0.54
SNAI2O43623 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC11.65□□□□□ -0.54
SNAI2O43623 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
SNAI2O43623 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
SNAI2O43623 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SNAI2O43623 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
SNAI2O43623 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SNAI2O43623 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
SNAI2O43623 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SNAI2O43623 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SNAI2O43623 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
SNAI2O43623 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
SNAI2O43623 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.55
SNAI2O43623 AL031595.1-201ENST00000623969 4709 ntBASIC11.65□□□□□ -0.55
SNAI2O43623 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC11.65□□□□□ -0.55
SNAI2O43623 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.55
SNAI2O43623 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
SNAI2O43623 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNAI2O43623 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
SNAI2O43623 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
SNAI2O43623 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC11.64□□□□□ -0.55
SNAI2O43623 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
SNAI2O43623 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC11.64□□□□□ -0.55
SNAI2O43623 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC11.64□□□□□ -0.55
SNAI2O43623 AC148477.4-201ENST00000613430 1793 ntBASIC11.64□□□□□ -0.55
SNAI2O43623 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNAI2O43623 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNAI2O43623 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SNAI2O43623 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNAI2O43623 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
SNAI2O43623 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
SNAI2O43623 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
SNAI2O43623 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNAI2O43623 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC11.64□□□□□ -0.55
SNAI2O43623 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNAI2O43623 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC11.64□□□□□ -0.55
SNAI2O43623 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC11.64□□□□□ -0.55
SNAI2O43623 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SNAI2O43623 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNAI2O43623 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNAI2O43623 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNAI2O43623 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC11.64□□□□□ -0.55
SNAI2O43623 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SNAI2O43623 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
SNAI2O43623 RPS2P28-201ENST00000314255 741 ntBASIC11.64□□□□□ -0.55
SNAI2O43623 FALEC-201ENST00000416894 566 ntTSL 3 BASIC11.64□□□□□ -0.55
SNAI2O43623 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC11.64□□□□□ -0.55
SNAI2O43623 HCG4P8-203ENST00000443049 980 ntBASIC11.64□□□□□ -0.55
SNAI2O43623 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNAI2O43623 AC012640.2-201ENST00000561606 901 ntBASIC11.64□□□□□ -0.55
SNAI2O43623 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC11.64□□□□□ -0.55
SNAI2O43623 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC11.64□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms