Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
O00370 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
O00370 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
O00370 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
O00370 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
O00370 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
O00370 AC098850.1-201ENST00000419919 790 ntBASIC16.48■□□□□ 0.23
O00370 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.48■□□□□ 0.23
O00370 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.48■□□□□ 0.23
O00370 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.48■□□□□ 0.23
O00370 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.48■□□□□ 0.23
O00370 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.48■□□□□ 0.23
O00370 AC190387.1-201ENST00000551683 408 ntBASIC16.48■□□□□ 0.23
O00370 AC093726.1-201ENST00000608064 963 ntBASIC16.48■□□□□ 0.23
O00370 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
O00370 AL662799.1-202ENST00000614205 422 ntBASIC16.48■□□□□ 0.23
O00370 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
O00370 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
O00370 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
O00370 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
O00370 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
O00370 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
O00370 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
O00370 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
O00370 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.48■□□□□ 0.23
O00370 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
O00370 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
O00370 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
O00370 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
O00370 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.48■□□□□ 0.23
O00370 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
O00370 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
O00370 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.47■□□□□ 0.23
O00370 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
O00370 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
O00370 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
O00370 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.47■□□□□ 0.23
O00370 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
O00370 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
O00370 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
O00370 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.47■□□□□ 0.23
O00370 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
O00370 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
O00370 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
O00370 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.47■□□□□ 0.23
O00370 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
O00370 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.47■□□□□ 0.23
O00370 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.47■□□□□ 0.23
O00370 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.47■□□□□ 0.23
O00370 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.47■□□□□ 0.23
O00370 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.47■□□□□ 0.23
O00370 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.47■□□□□ 0.23
O00370 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.47■□□□□ 0.23
O00370 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.47■□□□□ 0.23
O00370 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.47■□□□□ 0.23
O00370 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.47■□□□□ 0.23
O00370 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.47■□□□□ 0.23
O00370 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.47■□□□□ 0.23
O00370 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
O00370 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
O00370 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
O00370 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
O00370 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
O00370 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
O00370 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
O00370 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
O00370 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
O00370 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
O00370 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.47■□□□□ 0.23
O00370 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
O00370 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
O00370 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.47■□□□□ 0.23
O00370 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
O00370 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
O00370 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
O00370 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
O00370 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.47■□□□□ 0.23
O00370 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
O00370 CICP24-201ENST00000605464 2705 ntBASIC16.47■□□□□ 0.23
O00370 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
O00370 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
O00370 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
O00370 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
O00370 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
O00370 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.46■□□□□ 0.23
O00370 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
O00370 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.46■□□□□ 0.23
O00370 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.46■□□□□ 0.23
O00370 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.46■□□□□ 0.23
O00370 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
O00370 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
O00370 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
O00370 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
O00370 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
O00370 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
O00370 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.46■□□□□ 0.23
O00370 AC087499.6-201ENST00000411576 835 ntBASIC16.46■□□□□ 0.23
O00370 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.46■□□□□ 0.23
O00370 GAPDHP40-201ENST00000505218 1006 ntBASIC16.46■□□□□ 0.23
O00370 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms