Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP3B1O00203 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
AP3B1O00203 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
AP3B1O00203 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP3B1O00203 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP3B1O00203 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
AP3B1O00203 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP3B1O00203 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.65■□□□□ 0.1
AP3B1O00203 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.65■□□□□ 0.1
AP3B1O00203 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.65■□□□□ 0.1
AP3B1O00203 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
AP3B1O00203 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.65■□□□□ 0.1
AP3B1O00203 AC092337.1-201ENST00000568699 1129 ntBASIC15.65■□□□□ 0.1
AP3B1O00203 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.65■□□□□ 0.1
AP3B1O00203 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.65■□□□□ 0.1
AP3B1O00203 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.65■□□□□ 0.1
AP3B1O00203 AC004461.2-201ENST00000629517 803 ntBASIC15.65■□□□□ 0.1
AP3B1O00203 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
AP3B1O00203 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
AP3B1O00203 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP3B1O00203 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.65■□□□□ 0.1
AP3B1O00203 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP3B1O00203 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.65■□□□□ 0.1
AP3B1O00203 AP002414.2-201ENST00000591780 3365 ntBASIC15.65■□□□□ 0.1
AP3B1O00203 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP3B1O00203 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP3B1O00203 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.65■□□□□ 0.1
AP3B1O00203 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP3B1O00203 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
AP3B1O00203 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.65■□□□□ 0.1
AP3B1O00203 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.65■□□□□ 0.1
AP3B1O00203 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
AP3B1O00203 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.64■□□□□ 0.1
AP3B1O00203 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3B1O00203 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3B1O00203 REXO1L2P-201ENST00000425429 2069 ntBASIC15.64■□□□□ 0.09
AP3B1O00203 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3B1O00203 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3B1O00203 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.64■□□□□ 0.09
AP3B1O00203 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.64■□□□□ 0.09
AP3B1O00203 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.64■□□□□ 0.09
AP3B1O00203 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3B1O00203 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.64■□□□□ 0.09
AP3B1O00203 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.64■□□□□ 0.09
AP3B1O00203 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3B1O00203 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
AP3B1O00203 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.64■□□□□ 0.09
AP3B1O00203 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.64■□□□□ 0.09
AP3B1O00203 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3B1O00203 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3B1O00203 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3B1O00203 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3B1O00203 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.64■□□□□ 0.09
AP3B1O00203 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3B1O00203 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
AP3B1O00203 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
AP3B1O00203 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3B1O00203 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
AP3B1O00203 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.64■□□□□ 0.09
AP3B1O00203 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.64■□□□□ 0.09
AP3B1O00203 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
AP3B1O00203 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
AP3B1O00203 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.64■□□□□ 0.09
AP3B1O00203 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
AP3B1O00203 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.64■□□□□ 0.09
AP3B1O00203 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3B1O00203 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
AP3B1O00203 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
AP3B1O00203 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
AP3B1O00203 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3B1O00203 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3B1O00203 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3B1O00203 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
AP3B1O00203 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3B1O00203 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.64■□□□□ 0.09
AP3B1O00203 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
AP3B1O00203 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
AP3B1O00203 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
AP3B1O00203 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3B1O00203 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3B1O00203 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.63■□□□□ 0.09
AP3B1O00203 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3B1O00203 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.63■□□□□ 0.09
AP3B1O00203 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
AP3B1O00203 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
AP3B1O00203 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3B1O00203 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
AP3B1O00203 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3B1O00203 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3B1O00203 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
AP3B1O00203 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.63■□□□□ 0.09
AP3B1O00203 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
AP3B1O00203 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3B1O00203 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3B1O00203 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
AP3B1O00203 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
AP3B1O00203 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.63■□□□□ 0.09
AP3B1O00203 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.63■□□□□ 0.09
AP3B1O00203 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3B1O00203 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms