Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
SRRM3A6NNA2 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.08■□□□□ 0.16
SRRM3A6NNA2 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SRRM3A6NNA2 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 AC067930.6-201ENST00000623257 4947 ntBASIC16.07■□□□□ 0.16
SRRM3A6NNA2 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 AC092933.1-201ENST00000393644 945 ntBASIC16.07■□□□□ 0.16
SRRM3A6NNA2 AL353779.1-201ENST00000434793 351 ntBASIC16.07■□□□□ 0.16
SRRM3A6NNA2 RN7SL752P-201ENST00000463779 287 ntBASIC16.07■□□□□ 0.16
SRRM3A6NNA2 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 ALG1L8P-201ENST00000533887 760 ntBASIC16.07■□□□□ 0.16
SRRM3A6NNA2 API5-211ENST00000534695 560 ntTSL 5 BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 AP001350.2-201ENST00000625104 1094 ntBASIC16.07■□□□□ 0.16
SRRM3A6NNA2 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRRM3A6NNA2 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 MIR4453-201ENST00000584019 89 ntBASIC16.06■□□□□ 0.16
SRRM3A6NNA2 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms