Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RGPD3A6NKT7 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RGPD3A6NKT7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RGPD3A6NKT7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.85■□□□□ 0.61
RGPD3A6NKT7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.85■□□□□ 0.61
RGPD3A6NKT7 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RGPD3A6NKT7 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RGPD3A6NKT7 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.85■□□□□ 0.61
RGPD3A6NKT7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RGPD3A6NKT7 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RGPD3A6NKT7 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RGPD3A6NKT7 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC18.85■□□□□ 0.61
RGPD3A6NKT7 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC18.85■□□□□ 0.61
RGPD3A6NKT7 AL035414.1-201ENST00000451327 857 ntBASIC18.85■□□□□ 0.61
RGPD3A6NKT7 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RGPD3A6NKT7 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC18.85■□□□□ 0.61
RGPD3A6NKT7 KRT8P1-201ENST00000557533 1207 ntBASIC18.85■□□□□ 0.61
RGPD3A6NKT7 AC004686.1-201ENST00000605113 538 ntBASIC18.85■□□□□ 0.61
RGPD3A6NKT7 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RGPD3A6NKT7 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC18.85■□□□□ 0.61
RGPD3A6NKT7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RGPD3A6NKT7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RGPD3A6NKT7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RGPD3A6NKT7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RGPD3A6NKT7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.85■□□□□ 0.61
RGPD3A6NKT7 TMBIM7P-202ENST00000641474 1516 ntBASIC18.85■□□□□ 0.61
RGPD3A6NKT7 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RGPD3A6NKT7 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RGPD3A6NKT7 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC18.84■□□□□ 0.61
RGPD3A6NKT7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RGPD3A6NKT7 KRT17P5-201ENST00000332088 839 ntBASIC18.84■□□□□ 0.61
RGPD3A6NKT7 AC106827.1-201ENST00000366454 431 ntBASIC18.84■□□□□ 0.61
RGPD3A6NKT7 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RGPD3A6NKT7 AC073869.2-201ENST00000417338 1026 ntBASIC18.84■□□□□ 0.61
RGPD3A6NKT7 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RGPD3A6NKT7 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RGPD3A6NKT7 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC18.84■□□□□ 0.61
RGPD3A6NKT7 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC18.84■□□□□ 0.61
RGPD3A6NKT7 MIR5001-201ENST00000580185 100 ntBASIC18.84■□□□□ 0.61
RGPD3A6NKT7 SIGLEC22P-201ENST00000599104 714 ntBASIC18.84■□□□□ 0.61
RGPD3A6NKT7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RGPD3A6NKT7 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RGPD3A6NKT7 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
RGPD3A6NKT7 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RGPD3A6NKT7 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RGPD3A6NKT7 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
RGPD3A6NKT7 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC18.83■□□□□ 0.61
RGPD3A6NKT7 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC18.83■□□□□ 0.61
RGPD3A6NKT7 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RGPD3A6NKT7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.83■□□□□ 0.61
RGPD3A6NKT7 AC093826.1-201ENST00000508655 993 ntBASIC18.83■□□□□ 0.61
RGPD3A6NKT7 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC18.83■□□□□ 0.61
RGPD3A6NKT7 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.61
RGPD3A6NKT7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
RGPD3A6NKT7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RGPD3A6NKT7 PKD1P6-201ENST00000343738 4769 ntBASIC18.83■□□□□ 0.61
RGPD3A6NKT7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
RGPD3A6NKT7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.83■□□□□ 0.61
RGPD3A6NKT7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RGPD3A6NKT7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.83■□□□□ 0.61
RGPD3A6NKT7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.83■□□□□ 0.61
RGPD3A6NKT7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RGPD3A6NKT7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RGPD3A6NKT7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RGPD3A6NKT7 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.6
RGPD3A6NKT7 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC18.83■□□□□ 0.6
RGPD3A6NKT7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RGPD3A6NKT7 PYY2-201ENST00000315776 282 ntBASIC18.83■□□□□ 0.6
RGPD3A6NKT7 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC18.83■□□□□ 0.6
RGPD3A6NKT7 SERBP1P2-201ENST00000436888 1164 ntBASIC18.83■□□□□ 0.6
RGPD3A6NKT7 AL451000.1-201ENST00000451300 1186 ntBASIC18.83■□□□□ 0.6
RGPD3A6NKT7 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC18.83■□□□□ 0.6
RGPD3A6NKT7 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC18.83■□□□□ 0.6
RGPD3A6NKT7 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC18.83■□□□□ 0.6
RGPD3A6NKT7 CHCHD2P2-201ENST00000503744 321 ntBASIC18.83■□□□□ 0.6
RGPD3A6NKT7 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RGPD3A6NKT7 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
RGPD3A6NKT7 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC18.83■□□□□ 0.6
RGPD3A6NKT7 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
RGPD3A6NKT7 ELP5-212ENST00000574255 671 ntTSL 2 BASIC18.83■□□□□ 0.6
RGPD3A6NKT7 TRMT112P3-201ENST00000580149 358 ntBASIC18.83■□□□□ 0.6
RGPD3A6NKT7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RGPD3A6NKT7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RGPD3A6NKT7 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
RGPD3A6NKT7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RGPD3A6NKT7 AL109809.1-201ENST00000418979 1367 ntBASIC18.82■□□□□ 0.6
RGPD3A6NKT7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RGPD3A6NKT7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.82■□□□□ 0.6
RGPD3A6NKT7 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC18.82■□□□□ 0.6
RGPD3A6NKT7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RGPD3A6NKT7 FAS-202ENST00000352159 1722 ntTSL 5 BASIC18.82■□□□□ 0.6
RGPD3A6NKT7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RGPD3A6NKT7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RGPD3A6NKT7 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RGPD3A6NKT7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RGPD3A6NKT7 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC18.82■□□□□ 0.6
RGPD3A6NKT7 AF274858.1-201ENST00000406288 372 ntBASIC18.82■□□□□ 0.6
RGPD3A6NKT7 AL929302.1-201ENST00000426556 871 ntBASIC18.82■□□□□ 0.6
RGPD3A6NKT7 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC18.82■□□□□ 0.6
RGPD3A6NKT7 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms