Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 AL158070.2-201ENST00000623713 1621 ntBASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 AC105129.2-201ENST00000559536 390 ntBASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 AC016629.1-201ENST00000596579 586 ntBASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 OR10B1P-201ENST00000601666 907 ntBASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC187A0A096LP49 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 SERPINA13P-202ENST00000478994 924 ntBASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 AC022616.1-201ENST00000518688 554 ntBASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 AL603764.1-201ENST00000636452 321 ntBASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 AC069224.1-201ENST00000566372 1715 ntBASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC187A0A096LP49 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 AL596087.1-201ENST00000400979 1969 ntBASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms