Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 KRT8P48-201ENST00000515599 1220 ntBASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 AC243562.1-201ENST00000560672 389 ntBASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 AC022145.2-201ENST00000598203 171 ntBASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 AL596442.2-201ENST00000610240 980 ntBASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 HSPA7-201ENST00000445535 1927 ntBASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP4B1Q9Y6B7 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 AC079140.1-201ENST00000508039 487 ntBASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 KRT8P23-201ENST00000560090 1207 ntBASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 ZBED1P1-201ENST00000502364 1930 ntBASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4B1Q9Y6B7 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms