Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RCL1Q9Y2P8 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RCL1Q9Y2P8 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
RCL1Q9Y2P8 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RCL1Q9Y2P8 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RCL1Q9Y2P8 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RCL1Q9Y2P8 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.71□□□□□ -0.37
RCL1Q9Y2P8 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC12.71□□□□□ -0.37
RCL1Q9Y2P8 AC113367.3-201ENST00000508316 1912 ntBASIC12.71□□□□□ -0.37
RCL1Q9Y2P8 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.71□□□□□ -0.37
RCL1Q9Y2P8 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RCL1Q9Y2P8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RCL1Q9Y2P8 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RCL1Q9Y2P8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC12.71□□□□□ -0.37
RCL1Q9Y2P8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RCL1Q9Y2P8 SAPCD2P3-201ENST00000455031 850 ntBASIC12.71□□□□□ -0.37
RCL1Q9Y2P8 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12.71□□□□□ -0.37
RCL1Q9Y2P8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
RCL1Q9Y2P8 POLD4-207ENST00000531239 584 ntTSL 2 BASIC12.71□□□□□ -0.37
RCL1Q9Y2P8 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC12.71□□□□□ -0.37
RCL1Q9Y2P8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC12.71□□□□□ -0.37
RCL1Q9Y2P8 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.71□□□□□ -0.37
RCL1Q9Y2P8 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC12.71□□□□□ -0.37
RCL1Q9Y2P8 CD7-202ENST00000578509 925 ntTSL 3 BASIC12.71□□□□□ -0.37
RCL1Q9Y2P8 AC061975.2-201ENST00000581722 295 ntBASIC12.71□□□□□ -0.37
RCL1Q9Y2P8 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC12.71□□□□□ -0.37
RCL1Q9Y2P8 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC12.71□□□□□ -0.37
RCL1Q9Y2P8 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RCL1Q9Y2P8 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RCL1Q9Y2P8 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
RCL1Q9Y2P8 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.71□□□□□ -0.38
RCL1Q9Y2P8 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.71□□□□□ -0.38
RCL1Q9Y2P8 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.71□□□□□ -0.38
RCL1Q9Y2P8 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
RCL1Q9Y2P8 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RCL1Q9Y2P8 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RCL1Q9Y2P8 AP002414.3-201ENST00000589352 1468 ntBASIC12.71□□□□□ -0.38
RCL1Q9Y2P8 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
RCL1Q9Y2P8 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
RCL1Q9Y2P8 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
RCL1Q9Y2P8 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
RCL1Q9Y2P8 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
RCL1Q9Y2P8 CICP11-201ENST00000434745 2827 ntBASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 DFFB-203ENST00000341385 572 ntTSL 5 BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 AC004987.2-201ENST00000395959 1148 ntBASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 KRT18P21-201ENST00000515767 1272 ntBASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 AC105339.3-201ENST00000560043 636 ntBASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 MIR4751-201ENST00000578027 74 ntBASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 AL121772.3-201ENST00000610840 674 ntBASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms