Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 AC093827.2-201ENST00000512654 315 ntBASIC13.85□□□□□ -0.19
SSR3Q9UNL2 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 AC021087.4-201ENST00000563761 564 ntBASIC13.85□□□□□ -0.19
SSR3Q9UNL2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 OR7E47P-204ENST00000575924 449 ntBASIC13.85□□□□□ -0.19
SSR3Q9UNL2 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 AL009183.1-201ENST00000603760 355 ntBASIC13.85□□□□□ -0.19
SSR3Q9UNL2 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.85□□□□□ -0.19
SSR3Q9UNL2 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 IER3-202ENST00000376377 1350 ntBASIC13.84□□□□□ -0.19
SSR3Q9UNL2 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 CICP11-201ENST00000434745 2827 ntBASIC13.84□□□□□ -0.19
SSR3Q9UNL2 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.84□□□□□ -0.19
SSR3Q9UNL2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 PHKG1P2-201ENST00000457537 863 ntBASIC13.84□□□□□ -0.19
SSR3Q9UNL2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 AC018529.2-202ENST00000611482 3087 ntBASIC13.84□□□□□ -0.19
SSR3Q9UNL2 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR3Q9UNL2 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.83□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms