Protein–RNA interactions for Protein: Q9NRA0

SPHK2, Sphingosine kinase 2, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2Q9NRA0 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPHK2Q9NRA0 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPHK2Q9NRA0 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.66■□□□□ 0.1
SPHK2Q9NRA0 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.66■□□□□ 0.1
SPHK2Q9NRA0 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPHK2Q9NRA0 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPHK2Q9NRA0 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SPHK2Q9NRA0 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.66■□□□□ 0.1
SPHK2Q9NRA0 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPHK2Q9NRA0 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPHK2Q9NRA0 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPHK2Q9NRA0 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.66■□□□□ 0.1
SPHK2Q9NRA0 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.66■□□□□ 0.1
SPHK2Q9NRA0 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPHK2Q9NRA0 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPHK2Q9NRA0 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPHK2Q9NRA0 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.66■□□□□ 0.1
SPHK2Q9NRA0 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPHK2Q9NRA0 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SPHK2Q9NRA0 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SPHK2Q9NRA0 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SPHK2Q9NRA0 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPHK2Q9NRA0 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 HLA-K-203ENST00000430151 1046 ntBASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 FAM8A4P-201ENST00000435433 1213 ntBASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 CNN2P10-201ENST00000443067 918 ntBASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 C2orf69P2-201ENST00000562032 1123 ntBASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 EEF1DP1-201ENST00000585891 896 ntBASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 AC243960.2-201ENST00000600996 747 ntBASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.65■□□□□ 0.1
SPHK2Q9NRA0 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPHK2Q9NRA0 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SPHK2Q9NRA0 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SPHK2Q9NRA0 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPHK2Q9NRA0 CICP11-201ENST00000434745 2827 ntBASIC15.64■□□□□ 0.09
SPHK2Q9NRA0 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPHK2Q9NRA0 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPHK2Q9NRA0 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPHK2Q9NRA0 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPHK2Q9NRA0 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPHK2Q9NRA0 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SPHK2Q9NRA0 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPHK2Q9NRA0 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SPHK2Q9NRA0 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPHK2Q9NRA0 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPHK2Q9NRA0 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
SPHK2Q9NRA0 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPHK2Q9NRA0 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SPHK2Q9NRA0 POM121L8P-201ENST00000417732 1281 ntBASIC15.64■□□□□ 0.09
SPHK2Q9NRA0 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.64■□□□□ 0.09
SPHK2Q9NRA0 POM121L9P-203ENST00000441984 1285 ntBASIC15.64■□□□□ 0.09
SPHK2Q9NRA0 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPHK2Q9NRA0 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SPHK2Q9NRA0 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.64■□□□□ 0.09
SPHK2Q9NRA0 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SPHK2Q9NRA0 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
SPHK2Q9NRA0 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPHK2Q9NRA0 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.64■□□□□ 0.09
SPHK2Q9NRA0 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.64■□□□□ 0.09
SPHK2Q9NRA0 AC244093.1-201ENST00000610837 814 ntBASIC15.64■□□□□ 0.09
SPHK2Q9NRA0 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.64■□□□□ 0.09
SPHK2Q9NRA0 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 223.8 ms