Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 AC093813.1-201ENST00000605066 256 ntBASIC15.82■□□□□ 0.12
ATP13A1Q9HD20 AL591163.1-201ENST00000641757 987 ntBASIC15.82■□□□□ 0.12
ATP13A1Q9HD20 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATP13A1Q9HD20 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.82■□□□□ 0.12
ATP13A1Q9HD20 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATP13A1Q9HD20 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP13A1Q9HD20 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.82■□□□□ 0.12
ATP13A1Q9HD20 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP13A1Q9HD20 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP13A1Q9HD20 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.82■□□□□ 0.12
ATP13A1Q9HD20 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP13A1Q9HD20 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP13A1Q9HD20 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP13A1Q9HD20 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP13A1Q9HD20 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP13A1Q9HD20 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATP13A1Q9HD20 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP13A1Q9HD20 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP13A1Q9HD20 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP13A1Q9HD20 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP13A1Q9HD20 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP13A1Q9HD20 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP13A1Q9HD20 AC138035.3-201ENST00000622706 2791 ntBASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 ENPP7P5-201ENST00000541031 1031 ntBASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 IGHV3-72-202ENST00000621503 303 ntBASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP13A1Q9HD20 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 AC126365.1-201ENST00000578585 1514 ntBASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 AC063926.2-201ENST00000623766 1308 ntBASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 AC010319.3-201ENST00000597028 470 ntBASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP13A1Q9HD20 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms