Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 AC011467.4-201ENST00000594891 528 ntBASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 AC004461.2-201ENST00000629517 803 ntBASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC40Q9H9A6 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 LINC00528-201ENST00000600723 2160 ntBASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 AC000095.1-201ENST00000603208 874 ntBASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 AL390754.1-201ENST00000619088 582 ntBASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 FAM45BP-202ENST00000592932 1624 ntBASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.72■□□□□ 0.11
LRRC40Q9H9A6 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 AC055876.3-201ENST00000431496 288 ntBASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 AC138649.4-201ENST00000612222 287 ntBASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC40Q9H9A6 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms