Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC136632.2-201ENST00000512891 861 ntBASIC10.29□□□□□ -0.76
LITAFQ99732 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC10.29□□□□□ -0.76
LITAFQ99732 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC10.29□□□□□ -0.76
LITAFQ99732 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC10.29□□□□□ -0.76
LITAFQ99732 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC10.29□□□□□ -0.76
LITAFQ99732 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
LITAFQ99732 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC10.29□□□□□ -0.76
LITAFQ99732 AC004241.5-201ENST00000623870 2448 ntBASIC10.29□□□□□ -0.76
LITAFQ99732 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
LITAFQ99732 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LITAFQ99732 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LITAFQ99732 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC10.29□□□□□ -0.76
LITAFQ99732 AL607033.1-201ENST00000623900 1599 ntBASIC10.29□□□□□ -0.76
LITAFQ99732 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC10.29□□□□□ -0.76
LITAFQ99732 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC10.29□□□□□ -0.76
LITAFQ99732 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LITAFQ99732 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LITAFQ99732 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
LITAFQ99732 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
LITAFQ99732 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
LITAFQ99732 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC10.29□□□□□ -0.76
LITAFQ99732 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
LITAFQ99732 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
LITAFQ99732 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC10.29□□□□□ -0.76
LITAFQ99732 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC10.29□□□□□ -0.76
LITAFQ99732 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LITAFQ99732 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LITAFQ99732 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LITAFQ99732 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
LITAFQ99732 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC10.28□□□□□ -0.76
LITAFQ99732 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
LITAFQ99732 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC10.28□□□□□ -0.76
LITAFQ99732 AC090505.1-201ENST00000430515 1834 ntBASIC10.28□□□□□ -0.76
LITAFQ99732 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC10.28□□□□□ -0.76
LITAFQ99732 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC10.28□□□□□ -0.76
LITAFQ99732 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC10.28□□□□□ -0.76
LITAFQ99732 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LITAFQ99732 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LITAFQ99732 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LITAFQ99732 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LITAFQ99732 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
LITAFQ99732 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC10.28□□□□□ -0.76
LITAFQ99732 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LITAFQ99732 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LITAFQ99732 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LITAFQ99732 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC10.28□□□□□ -0.76
LITAFQ99732 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LITAFQ99732 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC10.28□□□□□ -0.76
LITAFQ99732 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LITAFQ99732 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
LITAFQ99732 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LITAFQ99732 MRPL20P1-201ENST00000400819 433 ntBASIC10.28□□□□□ -0.76
LITAFQ99732 AC092474.2-201ENST00000424288 719 ntBASIC10.28□□□□□ -0.76
LITAFQ99732 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC10.28□□□□□ -0.76
LITAFQ99732 FGFR3P6-201ENST00000457012 610 ntBASIC10.28□□□□□ -0.76
LITAFQ99732 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC10.28□□□□□ -0.76
LITAFQ99732 AC022447.6-201ENST00000515522 438 ntBASIC10.28□□□□□ -0.76
LITAFQ99732 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LITAFQ99732 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC10.28□□□□□ -0.76
LITAFQ99732 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC10.28□□□□□ -0.76
LITAFQ99732 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC10.28□□□□□ -0.76
LITAFQ99732 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC10.28□□□□□ -0.76
LITAFQ99732 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC10.28□□□□□ -0.76
LITAFQ99732 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC10.28□□□□□ -0.76
LITAFQ99732 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC10.28□□□□□ -0.76
LITAFQ99732 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC10.28□□□□□ -0.76
LITAFQ99732 AC107918.4-202ENST00000641623 219 ntBASIC10.28□□□□□ -0.76
LITAFQ99732 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LITAFQ99732 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC10.28□□□□□ -0.76
LITAFQ99732 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LITAFQ99732 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LITAFQ99732 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
LITAFQ99732 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
LITAFQ99732 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
LITAFQ99732 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
LITAFQ99732 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LITAFQ99732 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LITAFQ99732 AL354702.1-201ENST00000442006 1960 ntBASIC10.28□□□□□ -0.76
LITAFQ99732 AC068760.1-201ENST00000493579 1953 ntBASIC10.28□□□□□ -0.76
LITAFQ99732 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LITAFQ99732 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LITAFQ99732 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC10.28□□□□□ -0.76
LITAFQ99732 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LITAFQ99732 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC10.28□□□□□ -0.76
LITAFQ99732 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LITAFQ99732 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
LITAFQ99732 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LITAFQ99732 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC10.28□□□□□ -0.76
LITAFQ99732 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LITAFQ99732 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
LITAFQ99732 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
LITAFQ99732 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC10.28□□□□□ -0.76
LITAFQ99732 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.76
LITAFQ99732 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC10.27□□□□□ -0.76
LITAFQ99732 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
LITAFQ99732 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
LITAFQ99732 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
LITAFQ99732 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
LITAFQ99732 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
LITAFQ99732 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms