Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC11.98□□□□□ -0.49
UBE2E2Q96LR5 BX539320.1-201ENST00000623759 877 ntBASIC11.98□□□□□ -0.49
UBE2E2Q96LR5 PFAS-212ENST00000625942 396 ntTSL 5 BASIC11.98□□□□□ -0.49
UBE2E2Q96LR5 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2E2Q96LR5 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC11.98□□□□□ -0.49
UBE2E2Q96LR5 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2E2Q96LR5 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2E2Q96LR5 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2E2Q96LR5 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2E2Q96LR5 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
UBE2E2Q96LR5 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2E2Q96LR5 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
UBE2E2Q96LR5 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2E2Q96LR5 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC11.98□□□□□ -0.49
UBE2E2Q96LR5 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC11.98□□□□□ -0.49
UBE2E2Q96LR5 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 AL645937.2-201ENST00000396808 931 ntBASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 GPR53P-205ENST00000457298 1084 ntBASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 CFL1-212ENST00000531413 636 ntTSL 3 BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 MIR5189-201ENST00000577370 114 ntBASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 BTNL10-201ENST00000595971 695 ntBASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 AP005019.2-201ENST00000615104 511 ntBASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC11.97□□□□□ -0.49
UBE2E2Q96LR5 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2E2Q96LR5 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2E2Q96LR5 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2E2Q96LR5 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2E2Q96LR5 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2E2Q96LR5 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2E2Q96LR5 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2E2Q96LR5 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2E2Q96LR5 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2E2Q96LR5 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2E2Q96LR5 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC11.96□□□□□ -0.49
UBE2E2Q96LR5 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2E2Q96LR5 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2E2Q96LR5 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2E2Q96LR5 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2E2Q96LR5 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2E2Q96LR5 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2E2Q96LR5 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2E2Q96LR5 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2E2Q96LR5 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2E2Q96LR5 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2E2Q96LR5 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
UBE2E2Q96LR5 GK-202ENST00000378941 458 ntTSL 3 BASIC11.96□□□□□ -0.49
UBE2E2Q96LR5 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms