Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
PHF3Q92576 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PHF3Q92576 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.93□□□□□ -0.18
PHF3Q92576 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PHF3Q92576 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.93□□□□□ -0.18
PHF3Q92576 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PHF3Q92576 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PHF3Q92576 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PHF3Q92576 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.93□□□□□ -0.18
PHF3Q92576 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
PHF3Q92576 AL607033.1-201ENST00000623900 1599 ntBASIC13.93□□□□□ -0.18
PHF3Q92576 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHF3Q92576 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.92□□□□□ -0.18
PHF3Q92576 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.92□□□□□ -0.18
PHF3Q92576 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHF3Q92576 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHF3Q92576 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHF3Q92576 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHF3Q92576 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PHF3Q92576 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHF3Q92576 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.92□□□□□ -0.18
PHF3Q92576 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PHF3Q92576 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.92□□□□□ -0.18
PHF3Q92576 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.92□□□□□ -0.18
PHF3Q92576 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHF3Q92576 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
PHF3Q92576 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.92□□□□□ -0.18
PHF3Q92576 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
PHF3Q92576 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHF3Q92576 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHF3Q92576 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHF3Q92576 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.92□□□□□ -0.18
PHF3Q92576 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.92□□□□□ -0.18
PHF3Q92576 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PHF3Q92576 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.92□□□□□ -0.18
PHF3Q92576 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.92□□□□□ -0.18
PHF3Q92576 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.92□□□□□ -0.18
PHF3Q92576 AC015910.1-201ENST00000579400 975 ntBASIC13.92□□□□□ -0.18
PHF3Q92576 BTNL10-201ENST00000595971 695 ntBASIC13.92□□□□□ -0.18
PHF3Q92576 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHF3Q92576 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHF3Q92576 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.92□□□□□ -0.18
PHF3Q92576 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PHF3Q92576 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHF3Q92576 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHF3Q92576 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.92□□□□□ -0.18
PHF3Q92576 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
PHF3Q92576 TNRC18P2-201ENST00000417666 2714 ntBASIC13.92□□□□□ -0.18
PHF3Q92576 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PHF3Q92576 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PHF3Q92576 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.92□□□□□ -0.18
PHF3Q92576 AC020658.6-201ENST00000623564 1870 ntBASIC13.92□□□□□ -0.18
PHF3Q92576 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.92□□□□□ -0.18
PHF3Q92576 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.92□□□□□ -0.18
PHF3Q92576 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHF3Q92576 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHF3Q92576 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
PHF3Q92576 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHF3Q92576 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.92□□□□□ -0.18
PHF3Q92576 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHF3Q92576 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHF3Q92576 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHF3Q92576 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHF3Q92576 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PHF3Q92576 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHF3Q92576 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.91□□□□□ -0.18
PHF3Q92576 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PHF3Q92576 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF3Q92576 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
PHF3Q92576 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.91□□□□□ -0.18
PHF3Q92576 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PHF3Q92576 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.91□□□□□ -0.18
PHF3Q92576 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.91□□□□□ -0.18
PHF3Q92576 AC138035.3-201ENST00000622706 2791 ntBASIC13.91□□□□□ -0.18
PHF3Q92576 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF3Q92576 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.91□□□□□ -0.18
PHF3Q92576 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF3Q92576 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.91□□□□□ -0.18
PHF3Q92576 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF3Q92576 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
PHF3Q92576 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.91□□□□□ -0.18
PHF3Q92576 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
PHF3Q92576 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PHF3Q92576 HR-201ENST00000312841 5351 ntTSL 5 BASIC13.91□□□□□ -0.18
PHF3Q92576 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF3Q92576 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PHF3Q92576 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF3Q92576 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PHF3Q92576 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.91□□□□□ -0.18
PHF3Q92576 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF3Q92576 NFIC-211ENST00000641145 8399 ntBASIC13.91□□□□□ -0.18
PHF3Q92576 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
PHF3Q92576 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF3Q92576 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PHF3Q92576 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.91□□□□□ -0.18
PHF3Q92576 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF3Q92576 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF3Q92576 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF3Q92576 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF3Q92576 BRWD1P1-201ENST00000401091 371 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms