Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 AL133267.1-201ENST00000398220 340 ntBASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 AL442647.2-201ENST00000429864 857 ntBASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 AC132938.2-201ENST00000579188 680 ntBASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 AL049840.4-201ENST00000602422 811 ntBASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 AC000095.1-201ENST00000603208 874 ntBASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 IGHV3-72-202ENST00000621503 303 ntBASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 AL591163.1-201ENST00000641757 987 ntBASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FNDC9Q8TBE3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.96□□□□□ -0.18
FNDC9Q8TBE3 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
FNDC9Q8TBE3 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
FNDC9Q8TBE3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
FNDC9Q8TBE3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
FNDC9Q8TBE3 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
FNDC9Q8TBE3 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.96□□□□□ -0.18
FNDC9Q8TBE3 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
FNDC9Q8TBE3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.96□□□□□ -0.18
FNDC9Q8TBE3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
FNDC9Q8TBE3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
FNDC9Q8TBE3 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
FNDC9Q8TBE3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
FNDC9Q8TBE3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
FNDC9Q8TBE3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 OR2I1P-210ENST00000642037 4691 ntBASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms