Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 AC009118.2-201ENST00000613275 655 ntBASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 CLK3P2-201ENST00000427566 1453 ntBASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 AC012508.2-201ENST00000567613 1472 ntBASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 MYO15B-237ENST00000642007 4893 ntBASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 SPDYE19P-201ENST00000338590 713 ntBASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 MIR770-201ENST00000390219 98 ntBASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 FAM86LP-201ENST00000478302 853 ntBASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 RRP7BP-205ENST00000566851 833 ntBASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 AC027796.2-201ENST00000575326 344 ntBASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 AL161772.1-201ENST00000610494 4412 ntBASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.36□□□□□ -0.11
CDRT4Q8N9R6 TNRC18P2-201ENST00000417666 2714 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms