Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 RBM17P3-201ENST00000417687 1192 ntBASIC14.63□□□□□ -0.07
LPCAT4Q643R3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 FAM86EP-206ENST00000510506 987 ntBASIC14.63□□□□□ -0.07
LPCAT4Q643R3 AL049597.2-201ENST00000565575 961 ntBASIC14.63□□□□□ -0.07
LPCAT4Q643R3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.63□□□□□ -0.07
LPCAT4Q643R3 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 KRT18P34-201ENST00000488218 1270 ntBASIC14.62□□□□□ -0.07
LPCAT4Q643R3 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 AP000867.3-201ENST00000524675 377 ntBASIC14.62□□□□□ -0.07
LPCAT4Q643R3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 AC116407.4-201ENST00000623319 1061 ntBASIC14.62□□□□□ -0.07
LPCAT4Q643R3 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.62□□□□□ -0.07
LPCAT4Q643R3 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LPCAT4Q643R3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LPCAT4Q643R3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.61□□□□□ -0.07
LPCAT4Q643R3 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.61□□□□□ -0.07
LPCAT4Q643R3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LPCAT4Q643R3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LPCAT4Q643R3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LPCAT4Q643R3 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LPCAT4Q643R3 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LPCAT4Q643R3 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
LPCAT4Q643R3 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LPCAT4Q643R3 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LPCAT4Q643R3 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LPCAT4Q643R3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms