Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
UBA52P62987 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.46□□□□□ -0.25
UBA52P62987 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBA52P62987 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBA52P62987 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBA52P62987 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.46□□□□□ -0.25
UBA52P62987 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBA52P62987 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBA52P62987 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.46□□□□□ -0.25
UBA52P62987 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
UBA52P62987 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
UBA52P62987 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.46□□□□□ -0.25
UBA52P62987 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.46□□□□□ -0.25
UBA52P62987 AC069120.2-201ENST00000524091 540 ntBASIC13.46□□□□□ -0.25
UBA52P62987 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.46□□□□□ -0.25
UBA52P62987 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.46□□□□□ -0.25
UBA52P62987 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.46□□□□□ -0.25
UBA52P62987 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBA52P62987 LINC02560-201ENST00000596379 459 ntBASIC13.46□□□□□ -0.25
UBA52P62987 AC008761.3-201ENST00000624803 892 ntBASIC13.46□□□□□ -0.25
UBA52P62987 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
UBA52P62987 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.46□□□□□ -0.25
UBA52P62987 AC084121.4-201ENST00000641598 221 ntBASIC13.46□□□□□ -0.25
UBA52P62987 AF228730.8-201ENST00000642140 221 ntBASIC13.46□□□□□ -0.25
UBA52P62987 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBA52P62987 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBA52P62987 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.46□□□□□ -0.25
UBA52P62987 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
UBA52P62987 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.46□□□□□ -0.25
UBA52P62987 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.46□□□□□ -0.25
UBA52P62987 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBA52P62987 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBA52P62987 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.25
UBA52P62987 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBA52P62987 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.26
UBA52P62987 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
UBA52P62987 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
UBA52P62987 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
UBA52P62987 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
UBA52P62987 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
UBA52P62987 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
UBA52P62987 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
UBA52P62987 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
UBA52P62987 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
UBA52P62987 WASH6P-202ENST00000359512 1437 ntBASIC13.46□□□□□ -0.26
UBA52P62987 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.46□□□□□ -0.26
UBA52P62987 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
UBA52P62987 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.45□□□□□ -0.26
UBA52P62987 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBA52P62987 AC010327.5-201ENST00000586923 3061 ntBASIC13.45□□□□□ -0.26
UBA52P62987 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBA52P62987 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
UBA52P62987 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.45□□□□□ -0.26
UBA52P62987 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
UBA52P62987 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBA52P62987 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.45□□□□□ -0.26
UBA52P62987 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.45□□□□□ -0.26
UBA52P62987 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.45□□□□□ -0.26
UBA52P62987 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.45□□□□□ -0.26
UBA52P62987 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
UBA52P62987 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
UBA52P62987 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBA52P62987 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBA52P62987 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
UBA52P62987 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
UBA52P62987 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
UBA52P62987 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBA52P62987 AL353732.1-201ENST00000569618 1459 ntBASIC13.45□□□□□ -0.26
UBA52P62987 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
UBA52P62987 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBA52P62987 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBA52P62987 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
UBA52P62987 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.45□□□□□ -0.26
UBA52P62987 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBA52P62987 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.45□□□□□ -0.26
UBA52P62987 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.45□□□□□ -0.26
UBA52P62987 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.45□□□□□ -0.26
UBA52P62987 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
UBA52P62987 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
UBA52P62987 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.45□□□□□ -0.26
UBA52P62987 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBA52P62987 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
UBA52P62987 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBA52P62987 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
UBA52P62987 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.45□□□□□ -0.26
UBA52P62987 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
UBA52P62987 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.45□□□□□ -0.26
UBA52P62987 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.45□□□□□ -0.26
UBA52P62987 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
UBA52P62987 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBA52P62987 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBA52P62987 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.45□□□□□ -0.26
UBA52P62987 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.45□□□□□ -0.26
UBA52P62987 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
UBA52P62987 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.45□□□□□ -0.26
UBA52P62987 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.45□□□□□ -0.26
UBA52P62987 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBA52P62987 AC006504.5-208ENST00000588784 2401 ntBASIC13.44□□□□□ -0.26
UBA52P62987 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
UBA52P62987 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms