Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.72□□□□□ -0.05
CLDN8P56748 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.72□□□□□ -0.05
CLDN8P56748 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.72□□□□□ -0.05
CLDN8P56748 AL512361.1-201ENST00000554200 418 ntBASIC14.72□□□□□ -0.05
CLDN8P56748 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CLDN8P56748 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CLDN8P56748 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.72□□□□□ -0.05
CLDN8P56748 LINC01115-203ENST00000606068 577 ntBASIC14.72□□□□□ -0.05
CLDN8P56748 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
CLDN8P56748 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.72□□□□□ -0.05
CLDN8P56748 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN8P56748 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN8P56748 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.72□□□□□ -0.05
CLDN8P56748 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN8P56748 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN8P56748 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CLDN8P56748 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN8P56748 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN8P56748 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN8P56748 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN8P56748 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.71□□□□□ -0.05
CLDN8P56748 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN8P56748 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN8P56748 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN8P56748 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN8P56748 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN8P56748 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN8P56748 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.71□□□□□ -0.05
CLDN8P56748 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
CLDN8P56748 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN8P56748 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN8P56748 AC138969.3-201ENST00000546612 1459 ntBASIC14.71□□□□□ -0.05
CLDN8P56748 AC138932.2-201ENST00000548268 1459 ntBASIC14.71□□□□□ -0.05
CLDN8P56748 AC126755.4-201ENST00000549796 1459 ntBASIC14.71□□□□□ -0.05
CLDN8P56748 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.71□□□□□ -0.05
CLDN8P56748 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN8P56748 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.71□□□□□ -0.05
CLDN8P56748 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
CLDN8P56748 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN8P56748 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN8P56748 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN8P56748 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN8P56748 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN8P56748 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CLDN8P56748 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CLDN8P56748 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.71□□□□□ -0.05
CLDN8P56748 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.71□□□□□ -0.05
CLDN8P56748 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.71□□□□□ -0.05
CLDN8P56748 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN8P56748 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN8P56748 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.71□□□□□ -0.05
CLDN8P56748 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.71□□□□□ -0.05
CLDN8P56748 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
CLDN8P56748 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.71□□□□□ -0.05
CLDN8P56748 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.71□□□□□ -0.05
CLDN8P56748 AC074044.1-201ENST00000609673 707 ntBASIC14.71□□□□□ -0.05
CLDN8P56748 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN8P56748 TEX28P1-201ENST00000613479 1221 ntBASIC14.71□□□□□ -0.05
CLDN8P56748 TEX28P2-201ENST00000617764 1221 ntBASIC14.71□□□□□ -0.05
CLDN8P56748 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.71□□□□□ -0.05
CLDN8P56748 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN8P56748 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
CLDN8P56748 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN8P56748 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN8P56748 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN8P56748 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.71□□□□□ -0.05
CLDN8P56748 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
CLDN8P56748 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CLDN8P56748 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
CLDN8P56748 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.71□□□□□ -0.06
CLDN8P56748 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.71□□□□□ -0.06
CLDN8P56748 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CLDN8P56748 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CLDN8P56748 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CLDN8P56748 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CLDN8P56748 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN8P56748 SNX18-202ENST00000343017 3140 ntBASIC14.7□□□□□ -0.06
CLDN8P56748 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN8P56748 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN8P56748 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.7□□□□□ -0.06
CLDN8P56748 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.7□□□□□ -0.06
CLDN8P56748 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CLDN8P56748 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
CLDN8P56748 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN8P56748 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
CLDN8P56748 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN8P56748 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN8P56748 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN8P56748 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CLDN8P56748 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN8P56748 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CLDN8P56748 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN8P56748 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN8P56748 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN8P56748 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN8P56748 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CLDN8P56748 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CLDN8P56748 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.7□□□□□ -0.06
CLDN8P56748 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.7□□□□□ -0.06
CLDN8P56748 CNN2P11-201ENST00000429351 262 ntBASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms