Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BRPF1P55201 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC19.62■□□□□ 0.73
BRPF1P55201 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
BRPF1P55201 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRPF1P55201 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRPF1P55201 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRPF1P55201 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRPF1P55201 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
BRPF1P55201 BCYRN1-201ENST00000418539 200 ntBASIC19.62■□□□□ 0.73
BRPF1P55201 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.62■□□□□ 0.73
BRPF1P55201 HLA-K-203ENST00000430151 1046 ntBASIC19.62■□□□□ 0.73
BRPF1P55201 TTTY23B-201ENST00000442790 549 ntBASIC19.62■□□□□ 0.73
BRPF1P55201 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRPF1P55201 KRT223P-202ENST00000449164 1292 ntBASIC19.62■□□□□ 0.73
BRPF1P55201 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BRPF1P55201 HNRNPA1P13-201ENST00000510646 963 ntBASIC19.62■□□□□ 0.73
BRPF1P55201 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC19.62■□□□□ 0.73
BRPF1P55201 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC19.62■□□□□ 0.73
BRPF1P55201 ENPP7P5-201ENST00000541031 1031 ntBASIC19.62■□□□□ 0.73
BRPF1P55201 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRPF1P55201 WASH4P-201ENST00000564273 1246 ntBASIC19.62■□□□□ 0.73
BRPF1P55201 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC19.62■□□□□ 0.73
BRPF1P55201 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC19.62■□□□□ 0.73
BRPF1P55201 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRPF1P55201 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC19.62■□□□□ 0.73
BRPF1P55201 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC19.62■□□□□ 0.73
BRPF1P55201 AC007431.3-201ENST00000623221 587 ntBASIC19.62■□□□□ 0.73
BRPF1P55201 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
BRPF1P55201 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BRPF1P55201 ACE3P-201ENST00000423435 1973 ntBASIC19.62■□□□□ 0.73
BRPF1P55201 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
BRPF1P55201 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC19.62■□□□□ 0.73
BRPF1P55201 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRPF1P55201 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BRPF1P55201 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC19.62■□□□□ 0.73
BRPF1P55201 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRPF1P55201 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRPF1P55201 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRPF1P55201 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRPF1P55201 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BRPF1P55201 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BRPF1P55201 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BRPF1P55201 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
BRPF1P55201 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BRPF1P55201 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BRPF1P55201 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRPF1P55201 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRPF1P55201 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRPF1P55201 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRPF1P55201 NUS1P3-201ENST00000423502 862 ntBASIC19.61■□□□□ 0.73
BRPF1P55201 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC19.61■□□□□ 0.73
BRPF1P55201 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC19.61■□□□□ 0.73
BRPF1P55201 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
BRPF1P55201 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BRPF1P55201 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC19.61■□□□□ 0.73
BRPF1P55201 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC19.61■□□□□ 0.73
BRPF1P55201 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC19.61■□□□□ 0.73
BRPF1P55201 MIR4538-201ENST00000581377 78 ntBASIC19.61■□□□□ 0.73
BRPF1P55201 AC133552.6-201ENST00000613406 534 ntBASIC19.61■□□□□ 0.73
BRPF1P55201 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
BRPF1P55201 RETN-203ENST00000629642 400 ntTSL 5 BASIC19.61■□□□□ 0.73
BRPF1P55201 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC19.61■□□□□ 0.73
BRPF1P55201 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC19.61■□□□□ 0.73
BRPF1P55201 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRPF1P55201 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC19.61■□□□□ 0.73
BRPF1P55201 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRPF1P55201 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRPF1P55201 AC144831.1-201ENST00000573312 2656 ntBASIC19.61■□□□□ 0.73
BRPF1P55201 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BRPF1P55201 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRPF1P55201 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRPF1P55201 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BRPF1P55201 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC19.61■□□□□ 0.73
BRPF1P55201 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BRPF1P55201 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRPF1P55201 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
BRPF1P55201 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRPF1P55201 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRPF1P55201 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRPF1P55201 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC19.61■□□□□ 0.73
BRPF1P55201 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC19.61■□□□□ 0.73
BRPF1P55201 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC19.61■□□□□ 0.73
BRPF1P55201 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
BRPF1P55201 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRPF1P55201 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRPF1P55201 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC19.61■□□□□ 0.73
BRPF1P55201 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC19.61■□□□□ 0.73
BRPF1P55201 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC19.6■□□□□ 0.73
BRPF1P55201 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BRPF1P55201 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
BRPF1P55201 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRPF1P55201 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRPF1P55201 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRPF1P55201 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRPF1P55201 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BRPF1P55201 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRPF1P55201 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
BRPF1P55201 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRPF1P55201 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRPF1P55201 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms