Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 AC093726.1-201ENST00000608064 963 ntBASIC16.55■□□□□ 0.24
RAD23BP54727 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.55■□□□□ 0.24
RAD23BP54727 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
RAD23BP54727 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAD23BP54727 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAD23BP54727 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RAD23BP54727 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAD23BP54727 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.55■□□□□ 0.24
RAD23BP54727 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
RAD23BP54727 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RAD23BP54727 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAD23BP54727 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAD23BP54727 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.55■□□□□ 0.24
RAD23BP54727 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.55■□□□□ 0.24
RAD23BP54727 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAD23BP54727 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.55■□□□□ 0.24
RAD23BP54727 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAD23BP54727 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAD23BP54727 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAD23BP54727 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAD23BP54727 KRT8P44-201ENST00000441609 1350 ntBASIC16.54■□□□□ 0.24
RAD23BP54727 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAD23BP54727 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.54■□□□□ 0.24
RAD23BP54727 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.54■□□□□ 0.24
RAD23BP54727 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RAD23BP54727 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAD23BP54727 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAD23BP54727 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.54■□□□□ 0.24
RAD23BP54727 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAD23BP54727 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAD23BP54727 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RAD23BP54727 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
RAD23BP54727 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.54■□□□□ 0.24
RAD23BP54727 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.54■□□□□ 0.24
RAD23BP54727 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
RAD23BP54727 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RAD23BP54727 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.54■□□□□ 0.24
RAD23BP54727 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAD23BP54727 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.54■□□□□ 0.24
RAD23BP54727 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.54■□□□□ 0.24
RAD23BP54727 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAD23BP54727 AC123567.1-201ENST00000548294 1261 ntBASIC16.54■□□□□ 0.24
RAD23BP54727 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.54■□□□□ 0.24
RAD23BP54727 MIR3197-201ENST00000582241 73 ntBASIC16.54■□□□□ 0.24
RAD23BP54727 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
RAD23BP54727 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.54■□□□□ 0.24
RAD23BP54727 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAD23BP54727 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAD23BP54727 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAD23BP54727 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAD23BP54727 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.54■□□□□ 0.24
RAD23BP54727 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.54■□□□□ 0.24
RAD23BP54727 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAD23BP54727 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
RAD23BP54727 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAD23BP54727 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.54■□□□□ 0.24
RAD23BP54727 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RAD23BP54727 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.54■□□□□ 0.24
RAD23BP54727 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAD23BP54727 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAD23BP54727 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAD23BP54727 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAD23BP54727 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAD23BP54727 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAD23BP54727 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAD23BP54727 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAD23BP54727 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAD23BP54727 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.53■□□□□ 0.24
RAD23BP54727 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.53■□□□□ 0.24
RAD23BP54727 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAD23BP54727 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAD23BP54727 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAD23BP54727 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.53■□□□□ 0.24
RAD23BP54727 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.53■□□□□ 0.24
RAD23BP54727 AC087499.6-201ENST00000411576 835 ntBASIC16.53■□□□□ 0.24
RAD23BP54727 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.53■□□□□ 0.24
RAD23BP54727 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.53■□□□□ 0.24
RAD23BP54727 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.53■□□□□ 0.24
RAD23BP54727 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.53■□□□□ 0.24
RAD23BP54727 CRB3P1-201ENST00000449338 276 ntBASIC16.53■□□□□ 0.24
RAD23BP54727 GAPDHP40-201ENST00000505218 1006 ntBASIC16.53■□□□□ 0.24
RAD23BP54727 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.53■□□□□ 0.24
RAD23BP54727 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.53■□□□□ 0.24
RAD23BP54727 SPDYE22P-201ENST00000582158 798 ntBASIC16.53■□□□□ 0.24
RAD23BP54727 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.53■□□□□ 0.24
RAD23BP54727 BRI3BPP1-201ENST00000594224 787 ntBASIC16.53■□□□□ 0.24
RAD23BP54727 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
RAD23BP54727 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.53■□□□□ 0.24
RAD23BP54727 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAD23BP54727 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAD23BP54727 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAD23BP54727 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAD23BP54727 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAD23BP54727 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAD23BP54727 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RAD23BP54727 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAD23BP54727 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.53■□□□□ 0.24
RAD23BP54727 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.53■□□□□ 0.24
RAD23BP54727 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RAD23BP54727 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms