Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GPC3P51654 PPT1-215ENST00000641471 2368 ntBASIC17.02■□□□□ 0.32
GPC3P51654 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GPC3P51654 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GPC3P51654 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.02■□□□□ 0.32
GPC3P51654 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
GPC3P51654 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GPC3P51654 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.02■□□□□ 0.32
GPC3P51654 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.02■□□□□ 0.32
GPC3P51654 AC087481.3-201ENST00000602886 1894 ntBASIC17.02■□□□□ 0.32
GPC3P51654 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.02■□□□□ 0.32
GPC3P51654 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.02■□□□□ 0.32
GPC3P51654 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
GPC3P51654 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.02■□□□□ 0.32
GPC3P51654 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.02■□□□□ 0.32
GPC3P51654 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
GPC3P51654 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.02■□□□□ 0.32
GPC3P51654 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
GPC3P51654 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
GPC3P51654 AC099336.1-201ENST00000417053 1171 ntBASIC17.02■□□□□ 0.32
GPC3P51654 AC016694.1-201ENST00000434179 700 ntBASIC17.02■□□□□ 0.32
GPC3P51654 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.02■□□□□ 0.32
GPC3P51654 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GPC3P51654 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.02■□□□□ 0.32
GPC3P51654 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.02■□□□□ 0.32
GPC3P51654 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
GPC3P51654 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GPC3P51654 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GPC3P51654 AC126177.1-201ENST00000547829 2218 ntBASIC17.02■□□□□ 0.32
GPC3P51654 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
GPC3P51654 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.02■□□□□ 0.31
GPC3P51654 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.02■□□□□ 0.31
GPC3P51654 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
GPC3P51654 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GPC3P51654 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
GPC3P51654 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.02■□□□□ 0.31
GPC3P51654 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
GPC3P51654 AC084364.1-201ENST00000551967 1556 ntBASIC17.02■□□□□ 0.31
GPC3P51654 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.02■□□□□ 0.31
GPC3P51654 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
GPC3P51654 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.01■□□□□ 0.31
GPC3P51654 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.01■□□□□ 0.31
GPC3P51654 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC3P51654 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
GPC3P51654 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GPC3P51654 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC3P51654 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
GPC3P51654 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC3P51654 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC3P51654 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC3P51654 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
GPC3P51654 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
GPC3P51654 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC3P51654 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.01■□□□□ 0.31
GPC3P51654 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC3P51654 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.01■□□□□ 0.31
GPC3P51654 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
GPC3P51654 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.01■□□□□ 0.31
GPC3P51654 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.01■□□□□ 0.31
GPC3P51654 AC104640.1-201ENST00000562617 2109 ntBASIC17.01■□□□□ 0.31
GPC3P51654 BX539320.1-201ENST00000623759 877 ntBASIC17.01■□□□□ 0.31
GPC3P51654 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GPC3P51654 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
GPC3P51654 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC3P51654 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC3P51654 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
GPC3P51654 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC3P51654 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC3P51654 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC3P51654 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GPC3P51654 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.01■□□□□ 0.31
GPC3P51654 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC3P51654 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17■□□□□ 0.31
GPC3P51654 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GPC3P51654 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GPC3P51654 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
GPC3P51654 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17■□□□□ 0.31
GPC3P51654 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
GPC3P51654 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17■□□□□ 0.31
GPC3P51654 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GPC3P51654 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17■□□□□ 0.31
GPC3P51654 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
GPC3P51654 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
GPC3P51654 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17■□□□□ 0.31
GPC3P51654 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17■□□□□ 0.31
GPC3P51654 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GPC3P51654 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17■□□□□ 0.31
GPC3P51654 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17■□□□□ 0.31
GPC3P51654 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17■□□□□ 0.31
GPC3P51654 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17■□□□□ 0.31
GPC3P51654 FO681548.1-201ENST00000455617 1132 ntBASIC17■□□□□ 0.31
GPC3P51654 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
GPC3P51654 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17■□□□□ 0.31
GPC3P51654 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17■□□□□ 0.31
GPC3P51654 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17■□□□□ 0.31
GPC3P51654 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17■□□□□ 0.31
GPC3P51654 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17■□□□□ 0.31
GPC3P51654 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17■□□□□ 0.31
GPC3P51654 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17■□□□□ 0.31
GPC3P51654 KRT90P-201ENST00000549264 1064 ntBASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms