Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PRIM2P49643 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PRIM2P49643 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
PRIM2P49643 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PRIM2P49643 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRIM2P49643 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PRIM2P49643 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.8□□□□□ -0.04
PRIM2P49643 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.8□□□□□ -0.04
PRIM2P49643 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRIM2P49643 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRIM2P49643 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRIM2P49643 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PRIM2P49643 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.8□□□□□ -0.04
PRIM2P49643 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRIM2P49643 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRIM2P49643 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PRIM2P49643 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PRIM2P49643 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRIM2P49643 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRIM2P49643 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRIM2P49643 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PRIM2P49643 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRIM2P49643 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
PRIM2P49643 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.79□□□□□ -0.04
PRIM2P49643 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PRIM2P49643 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRIM2P49643 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PRIM2P49643 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.79□□□□□ -0.04
PRIM2P49643 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRIM2P49643 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PRIM2P49643 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRIM2P49643 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRIM2P49643 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRIM2P49643 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRIM2P49643 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
PRIM2P49643 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.79□□□□□ -0.04
PRIM2P49643 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.79□□□□□ -0.04
PRIM2P49643 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PRIM2P49643 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PRIM2P49643 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PRIM2P49643 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PRIM2P49643 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.79□□□□□ -0.04
PRIM2P49643 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.79□□□□□ -0.04
PRIM2P49643 AL512356.2-201ENST00000546955 174 ntBASIC14.79□□□□□ -0.04
PRIM2P49643 HNRNPUP1-201ENST00000554987 333 ntBASIC14.79□□□□□ -0.04
PRIM2P49643 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
PRIM2P49643 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.79□□□□□ -0.04
PRIM2P49643 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.79□□□□□ -0.04
PRIM2P49643 AL133215.2-201ENST00000609242 977 ntBASIC14.79□□□□□ -0.04
PRIM2P49643 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRIM2P49643 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.79□□□□□ -0.04
PRIM2P49643 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.79□□□□□ -0.04
PRIM2P49643 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.79□□□□□ -0.04
PRIM2P49643 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRIM2P49643 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRIM2P49643 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRIM2P49643 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PRIM2P49643 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRIM2P49643 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRIM2P49643 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRIM2P49643 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.79□□□□□ -0.04
PRIM2P49643 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRIM2P49643 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.78□□□□□ -0.04
PRIM2P49643 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRIM2P49643 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
PRIM2P49643 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRIM2P49643 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.78□□□□□ -0.04
PRIM2P49643 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.78□□□□□ -0.04
PRIM2P49643 AGAP7P-201ENST00000582299 2062 ntBASIC14.78□□□□□ -0.04
PRIM2P49643 AGAP14-201ENST00000624701 2060 ntBASIC14.78□□□□□ -0.04
PRIM2P49643 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PRIM2P49643 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PRIM2P49643 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.78□□□□□ -0.04
PRIM2P49643 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PRIM2P49643 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PRIM2P49643 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.78□□□□□ -0.04
PRIM2P49643 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.78□□□□□ -0.04
PRIM2P49643 KRT8P12-202ENST00000472924 1397 ntBASIC14.78□□□□□ -0.04
PRIM2P49643 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRIM2P49643 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRIM2P49643 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRIM2P49643 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRIM2P49643 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.78□□□□□ -0.04
PRIM2P49643 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
PRIM2P49643 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.78□□□□□ -0.04
PRIM2P49643 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.78□□□□□ -0.04
PRIM2P49643 AC069262.1-201ENST00000539058 672 ntBASIC14.78□□□□□ -0.04
PRIM2P49643 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRIM2P49643 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.78□□□□□ -0.04
PRIM2P49643 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.78□□□□□ -0.04
PRIM2P49643 LINC00628-201ENST00000628516 1289 ntBASIC14.78□□□□□ -0.04
PRIM2P49643 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRIM2P49643 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRIM2P49643 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRIM2P49643 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRIM2P49643 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.78□□□□□ -0.04
PRIM2P49643 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PRIM2P49643 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRIM2P49643 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
PRIM2P49643 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms